Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=2327013 Score = 96.9 bits (106), Expect = 3e-15 Identities = 206/308 (67%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||||||||||| | | |||| || || || || |||||| | || ||||| | Sbjct 589960 ACGTAAAACTGCGCGAAGACGTGACAGGGTGGCAGCGCCATGGCGGGCAGATCTTTCACG 590019 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 ||||| |||| | | |||||| | ||| ||| ||| ||| | | |||| Sbjct 590020 TTCCACGCGCTGAGCAGGATGCGTCGGTCGAAGGGGCTGTCCCTCAGTTTGCGCACGATC 590079 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30241 | | | |||||| |||||| |||| |||||| || ||| |||||||| || Sbjct 590080 TCCCGGATCTGATCGACCCCCTTCCCTTGGTAGTCGGCGTGGCAGTCGGTGTACTCGGCG 590139 Query 30242 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30301 ||||| || | ||||||||| ||||| |||||||| ||||| || ||||||| || | Sbjct 590140 CCGAAGTGGCGCCACTGGAAGCCGTAGACCGGTCCTAGGTCGCCTTCTTCCCGCGACTGG 590199 Query 30302 AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30361 ||||| ||| | || | | || || ||| |||||||||| | | ||| | Sbjct 590200 AAGCCGAGTGCGTCGAGGTAGGCGCGCGACCCATTGCCGTCCCAGATGTGGATCCCGGCC 590259 Query 30362 TCAGAGAG 30369 || ||||| Sbjct 590260 TCGGAGAG 590267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310201923680