Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq9 114 8e-21 >seq9 Length=1292822 Score = 114 bits (126), Expect = 8e-21 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 |||||| | ||| | ||||||||| || || ||||||||||| || | ||| || | || Sbjct 436459 CAACACGAGATGCAAAGTGCTCTCTTTCTGGATGTTATAATCCGACAATGTCCGACCATC 436518 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| | || || |||||||| || | |||||||| || || || | ||||| ||||| Sbjct 436519 TTCCAACTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCTGGGGGAATACCCTCTTTGTC 436578 Query 34614 TGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 | |||| || | || || || ||||| || ||| |||||||| | || || | Sbjct 436579 TTGGATC-TTGCTCTTCACATTATCGATTGTATCCGAGCTTTCCACTTCGAGTGTGATGG 436637 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || || ||||| ||||||||| Sbjct 436638 TTTTCCCTGTCAAGGTCTTGACAAAGATCTGCATG 436672 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| || ||||| || || || || || || Sbjct 437192 AGACGAAGAACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCGGATAGGGTACGG 437251 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || ||||| ||||| || || | |||||| || ||||| || | |||||| Sbjct 437252 CCGTCTTCGAGCTGTTTGCCGGCGAAGATAAGACGCTGCTGATCCGGGGGAATACCCTCC 437311 Query 34609 TTGTC 34613 ||||| Sbjct 437312 TTGTC 437316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729446569320