Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq9 100 2e-16 >seq9 Length=1292822 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || | || |||||| || ||| | || || |||||| | Sbjct 436671 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAAACCATCACACTCGAAGTGGAAAGCTCG 436612 Query 27850 GACGATGTACAATCGGTCAAACAAAAA---ATAGCC--GACAAAGAAGGTGTTCCGATGG 27904 || |||||||| | | || | | | || |||||||| ||| |||| | Sbjct 436611 GA-----TACAATCGATAATGTGAAGAGCAAGATCCAAGACAAAGAGGGTATTCCCCCAG 436557 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || || || | || |||||||| || || ||||| || | || | ||||| |||| Sbjct 436556 ATCAACAGCGCCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGGACATTGTCGGATT 436497 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 | |||||||| |||||||||||||||||| | || ||| | ||||||| ||| Sbjct 436496 ATAACATCCAGAAAGAGAGCACTTTGCATCTCGTGTTGAGACTGCGTGGTGGC 436444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862226517080