Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq18 260 2e-64 seq9 194 2e-44 >seq18 Length=894979 Score = 260 bits (288), Expect = 2e-64 Identities = 1207/1895 (64%), Gaps = 53/1895 (3%) Strand=Plus/Minus Query 76776 TCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTT 76835 |||| ||| ||||| || || | ||| |||| | ||||| || |||||||| || || Sbjct 725517 TCCACTGTGAACTGGATGGGTGCAGAGGCGGCCATGGTACGCAGGTAGTACATTCCCGTC 725458 Query 76836 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCG 76895 || | || || |||| || ||||||||| || | ||| |||| || Sbjct 725457 TTCAAGCCAAGTTTCCACCCAGCAAAATGCATGGAGGTGATCTTGCCCATGGTAGGCTCC 725398 Query 76896 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 76955 | ||||||||| | ||||| ||| || ||||| || || | |||||| ||||| Sbjct 725397 TTGAGATGAATATTTAGAGACTGGGATTGGTCAATGAATGCACCCCGATCAGCAGCCATC 725338 Query 76956 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 77015 | | ||| || ||| || ||||||| ||| ||| | | | |||||||||| | Sbjct 725337 TGCACAATAGTTCGTTGGCTGATCTCCCAAACAGTCTTGTACAATGCTTTGATATCAGCA 725278 Query 77016 GGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCA 77072 |||| ||| | ||||||| | || || ||||| | || ||| | ||||| || | Sbjct 725277 GGAATGTTGGGAATATTTTGGACTGAGCCGCCATCAGCAATGATTCTGTTCTTCATGTTG 725218 Query 77073 TCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 || ||| | | || | | || | | || ||||| || | || ||| Sbjct 725217 TCGGACCAGAGACCCAGATCAACAAGATCTTTCAACAGCCATGGATTGACGACCTGGAAT 725158 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 ||||||| || || | ||||| ||| ||||| ||||||||| || | | | || ||| Sbjct 725157 TCTCCAGCCAGGACGCGACGAGAGTAGATATTCGAGGTATATGGCTCGAAACACTCGTTG 725098 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 |||||||| || || | || || || || |||||||| ||||| | | | || | Sbjct 725097 TTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCGA 725038 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 | |||||| | ||| | | | || | ||||||||| | ||| || ||| Sbjct 725037 ACACCATGCTTGGCGATGTCAGCCTTCAAGCTGGCCCAATCCCACAAATCCGACGGTGTG 724978 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT-GATCCATTATATGTTTC 77371 || |||| | ||||| || || || || | || | || || | || || || Sbjct 724977 ACGCCCCACATGTCGTACTGAAGCTCGCCTTT-CGAGACTGGAGAACCCTCGTACGTCTC 724919 Query 77372 ATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTG 77430 ||| | ||| || ||| || || ||||| || | ||| || | ||| || | Sbjct 724918 ATATGTTCCGAGCTCTTTG-GCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAGATCG 724860 Query 77431 TTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAA 77490 |||| || |||| | || || | |||||||| | ||| || || | | || Sbjct 724859 TTTCAAATATCTGGGTGTTTAGTTGACGTGCTTCAGGAGAATCGAATGGCAGACGCAATG 724800 Query 77491 GAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 77550 || |||||||||||| | |||||||| |||| ||||||||||||||||| || Sbjct 724799 CAAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTC-------GG 724747 Query 77551 AAATT--TTAG------CTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAG 77602 ||||| || | || || || | ||||||| | || || | | | || || Sbjct 724746 AAATTGCTTCGGCGTGCCTCCTCGACT-GGATAATGGCTGCGTTCGATGACTCTGTTCAG 724688 Query 77603 ATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAAT---CTTCCATC 77659 || | || || | ||||| || | || ||| || | | || | | Sbjct 724687 GTTGCGTGTCACGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTACTCGCCTCGACC 724628 Query 77660 T--AT-AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716 || |||| | || | ||| | ||||| ||||| |||||||| ||||||| | Sbjct 724627 AGAATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTG- 724569 Query 77717 GTTGGCA-TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775 || || |||| | ||||| || || ||||| | | |||||| || || || | Sbjct 724568 GTGCGCTGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCT 724509 Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835 |||||||||||||| || || | ||||||||||| || |||| ||||| || || Sbjct 724508 TCTGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTG 724449 Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC--- 77892 |||| || || | ||| | | ||||| | ||| | || || || ||| | Sbjct 724448 TCTGAGACTCAAGAATTGCATACCAGA-GTTTCTGGGCCTT--CACAGCTTTCCGACCAC 724392 Query 77893 -GCCTCTCT-CTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 |||| || || || | ||| | ||| || || || || || | ||||| | Sbjct 724391 GGCCTTCCTTCTCGTATCTCTCGTAAAGTGCC--TCGAACTCGTCACCATACACATCTGC 724334 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 || || || || | ||||| | | | ||||||| || | || || ||||| Sbjct 724333 CAGGCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTT 724274 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || || || || |||| |||||| || |||||||||| | ||| || || Sbjct 724273 CATGAATAGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTT 724214 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| ||| || | ||| || | | || | ||||||||| || ||||| Sbjct 724213 GCCGTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATA 724154 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 ||| || | | || || || || || || || ||||| | ||| | |||||||| || Sbjct 724153 TATAGCGAAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTT 724094 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 | || | ||||| ||| | | ||||| |||| |||||||| ||| ||| || Sbjct 724093 GAAGACGCGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGA 724034 Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310 ||| | |||||||| || | | ||| || ||||| || |||| || || | Sbjct 724033 ACCAGTAGCGCGAATGCAGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCAT 723974 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 || || ||| | || |||||||| || || |||||||| || |||| | | || Sbjct 723973 GGCACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGAG 723914 Query 78371 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 || ||| | || || || || || || || || | || ||||| ||||| Sbjct 723913 GAAGCAGGACGCCAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCATG 723854 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CC 78486 || || | |||| || | || ||||| |||||||| || || ||||| || Sbjct 723853 TGTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGCCCTCTCGATGTCGTCGCC 723794 Query 78487 ATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTAT 78546 || |||| || || | |||||||| | ||| || || ||||| ||| | | | Sbjct 723793 ATGGATG----CCCACAGAAACACGCATAAGCATGTGTTGGGGTCTCTCAGCTACTTGTT 723738 Query 78547 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 78604 || || || | | ||||| |||||||||||| || || ||||| | ||| ||| Sbjct 723737 TACCAATCTTGAGGAGATATGAACGTTCCAAAGTTTTGAAGCCGAAATATTGGTAATTGA 723678 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTT 78639 || ||||| || || | ||| |||| || |||| Sbjct 723677 AA--TCTCTGTCATAGACGATAGCAGAGTTCAGTT 723645 >seq9 Length=1292822 Score = 194 bits (214), Expect = 2e-44 Identities = 553/846 (65%), Gaps = 8/846 (1%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 |||||||| |||||||| || |||||||| || || |||||||| | | || ||||| Sbjct 487334 TTTTGATAGTCACCCACGCGCTTCTCGAAGAAGTTGGTTTTGCCAGCAAGAGAGATATTG 487275 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || || || ||||| |||| |||| || || || | | || Sbjct 487274 TCCATGAAGTCGAAGGGATTCGTAACATTGTAAAACTTGTTGTTGCCAAGAGCAACAAGT 487215 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 || | ||| ||||| ||||| || ||| ||||||| | ||||| || | | | Sbjct 487214 AGACGATCAGCAACAAATTCAATGTATTGCTTCATCAAGGTCGAGTTCATGCCGAGCAAT 487155 Query 48030 TTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATC 48089 || ||||| || || ||||||||||| ||||| ||| || || ||| || Sbjct 487154 GCGCACGGCAGAGCATCAGTGAGAAACTCTTGCTCGATCACGACTGCCTCGGTTATGATG 487095 Query 48090 GATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAA 48149 | ||||| | || |||| | | || |||| | || |||||| Sbjct 487094 TCTTCTACCGCCTGCTTTGATGGTCTGTGGTTTAGGTGGGAGAACAAGAGGCAGGCAAAA 487035 Query 48150 TCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATT 48209 || ||| ||||| || || | | || | || || || || |||||||| ||||| Sbjct 487034 TCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACCTGGCATC 486975 Query 48210 AGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 48269 || ||||| || ||||||||||| | | ||||| || ||||||||||| || || || Sbjct 486974 AGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGATTCCCTCG 486915 Query 48270 ACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGT 48326 ||||| || || || ||| | | | || | | || |||| ||||| || Sbjct 486914 ACGGCTGCGAAGGCAACAAGGCGTTGAGCAAAAGTCGACTCCTTGTCCGAAATCCATCGA 486855 Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386 | ||||| | || || || | ||||| || || || || || | || || | Sbjct 486854 AGAGCCCAGTTGGCTTTTTTTCGGATGCAAGGAATGGTGTCAATGGCGTCGAACAGGTAT 486795 Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 | | ||| || || || | ||| || || || || | ||| ||||| || |||||| Sbjct 486794 TGTCTTTGTTTTGGCTCCTTGATGTACGTGTCAATCAACAAACTGTACATCTCCGAGTGA 486735 Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506 || || || || || ||||| || || || || | || || | || || || || Sbjct 486734 ATGTTCTCCATCATGATTTGAAAGCCATAGAAGCACCGAGCCTCGGGTATTTGGACTTCG 486675 Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 |||||||||| | | ||| ||||| || || |||||||| |||||||| || || Sbjct 486674 CCTGAAAATCGTTCGACGAGATTTTCATTGACAATGCCATCACTGGCAGCAAAGAAGGCA 486615 Query 48567 AATACATGTTTAATAAAATATTTTTCGT--TGG--AAGTCAGTTTATTCCAGTCATTGAT 48622 | || || | || ||| |||||| | | || | ||| | ||||||||| Sbjct 486614 AGGACGTGGGAGACGAAGTATCTTTCGTCATCGTTTAGAC-GTTCACTCCAGTCATGTTG 486556 Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACAT 48682 ||||||||| | || |||||||| |||||||| || || || || ||||| |||||||| Sbjct 486555 ATCTTTTGACAGGTCGACTTCTTCTGCTGTCCAGAAAGAAGCTTCGGCTTTCTTATACAT 486496 Query 48683 ATTCCA 48688 | ||| Sbjct 486495 CTGCCA 486490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668452665600