Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq18 257 2e-63 seq9 224 1e-53 >seq18 Length=894979 Score = 257 bits (284), Expect = 2e-63 Identities = 1210/1898 (64%), Gaps = 59/1898 (3%) Strand=Plus/Minus Query 75371 TCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTT 75430 |||| |||||||| ||||| | || || | | ||||| || |||||||| || || Sbjct 725517 TCCACTGTGAACTGGATGGGTGCAGAGGCGGCCATGGTACGCAGGTAGTACATTCCCGTC 725458 Query 75431 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCG 75490 || | || || |||| || ||||||||| || | ||| | || || Sbjct 725457 TTCAAGCCAAGTTTCCACCCAGCAAAATGCATGGAGGTGATCTTGCCCATGGTAGGCTCC 725398 Query 75491 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 75550 | ||||||||| | ||||| ||| || ||||| || || | |||||| ||||| Sbjct 725397 TTGAGATGAATATTTAGAGACTGGGATTGGTCAATGAATGCACCCCGATCAGCAGCCATC 725338 Query 75551 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 75610 | | ||| || ||| || ||||||| ||| ||| | | | |||||||||| | Sbjct 725337 TGCACAATAGTTCGTTGGCTGATCTCCCAAACAGTCTTGTACAATGCTTTGATATCAGCA 725278 Query 75611 GGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCA 75667 |||| || | ||||||| | || |||||||||| || ||| | ||||| || | Sbjct 725277 GGAATGTTGGGAATATTTTGGACTGAGCCGCCATCAGCAATGATTCTGTTCTTCATGTTG 725218 Query 75668 TCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAAT 75727 || ||| | || | | || | | || ||||| || | || ||| Sbjct 725217 TCGGACCAGAGACCCAGATCAACAAGATCTTTCAACAGCCATGGATTGACGACCTGGAAT 725158 Query 75728 TCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 75787 ||||||| || || | |||| ||| ||||| ||||||||| || | | | || ||| Sbjct 725157 TCTCCAGCCAGGACGCGACGAGAGTAGATATTCGAGGTATATGGCTCGAAACACTCGTTG 725098 Query 75788 TTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTG 75847 |||||||| || || | || || || ||||||||||| ||||| | | | || | Sbjct 725097 TTTCCCAAGATCTGGGAGGTGGATGCTGTCGGCATAGGCGCCACAAGGAGAGAGTTGCGA 725038 Query 75848 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 | |||||| | ||| | | | || | ||||||||| | ||| || ||| Sbjct 725037 ACACCATGCTTGGCGATGTCAGCCTTCAAGCTGGCCCAATCCCACAAATCCGACGGTGTG 724978 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATAT-GATCCATTATATGTTTC 75966 || |||| | ||||| || || || || | || | || || | || || || Sbjct 724977 ACGCCCCACATGTCGTACTGAAGCTCGCCTTT-CGAGACTGGAGAACCCTCGTACGTCTC 724919 Query 75967 GTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGT 76026 || || ||| || || || || || || || | || || | ||| || || Sbjct 724918 ATATGTTCCGAGCTCTTTGGCAAGCTCACAGGAGGCAGTGAGTGCGCCATGATAGATCGT 724859 Query 76027 TTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG 76086 ||| || |||| | || || | | |||||| || ||| || || | | || Sbjct 724858 TTCAAATATCTGGGTGTTTAGTTGACGTGCTTCAGGAGAATCGAATGGCAGACGCAATGC 724799 Query 76087 AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || ||| |||||||| || |||||||| |||| ||||||||||||||||| ||| Sbjct 724798 AAGAAAGGCATCTGCAAGACCCTGAACACCAAGACCAATAGGTCTATGTC-------GGA 724746 Query 76147 AATT---TCAGCTT-----CTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA 76198 |||| || || | || || | || |||| | || || | | | || || Sbjct 724745 AATTGCTTCGGCGTGCCTCCTCGACT-GGATAATGGCTGCGTTCGATGACTCTGTTCAGG 724687 Query 76199 TTTC-TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTAT 76257 || | || || | || | ||||| || | || | ||| || | | || || | Sbjct 724686 TTGCGTGTCA-CGACCTGGACCACTTCGTGGAGGCGGCCAAAGTCGTACTCGCC-TCGAC 724629 Query 76258 CACAA---ACATATT----AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 || || ||||| |||||| | ||||| ||||| ||||| || ||||||| | Sbjct 724628 CAGAATCAACATAAGTGGGAAGAGCCAACGATGCCAGATTGCAAACTGCGACCTCATCTG 724569 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | |||| | ||||| ||||| ||||| | |||||| ||||| || | Sbjct 724568 GTGCGCTGTATTCAACAATCTCAGTGCAGAGATTGGAGCTTCGGATAGTCCCAAGGTTCT 724509 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 |||||||||||||||||||| | ||||||||||| | |||| || ||||| || Sbjct 724508 TCTGGTTGCTCTTTTTGTTACACGCATCCTTATAAAGCATGTACGGCGTCCCAGTCTCTG 724449 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCG-- 76488 |||| || || | ||| | | ||||| | ||| | || | || ||| | Sbjct 724448 TCTGAGACTCAAGAATTGCATACCAGA-GTTTCTGGGCCTTC--ACAGCTTTCCGACCAC 724392 Query 76489 ---CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATC 76545 |||| ||| || | ||| | || || || || || || | ||||| | Sbjct 724391 GGCCTTCCTTCTCGTATCTCTCGTAAAGTGCC--TCGAACTCGTCACCATACACATCTGC 724334 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 || || ||| || | || || | | | ||| ||| || | || || ||||| Sbjct 724333 CAGGCCTGGAGCCTCGTGAGGGCAGAAGAGAGTCCAGTCAAGATTCTTCTCGACACGTTT 724274 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 ||| || || || || |||| |||||| || |||||||||| | | ||| || || Sbjct 724273 CATGAATAGGTCTGGGGTCCAGAGAGCATAGAAGAGATCTCGGGCCCGGCTTTCCTCCTT 724214 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || |||||| ||| || | || || | | || | ||||||||| || ||||| Sbjct 724213 GCCGTGATTCTTGCGAAGGTCCAAAAAGTCAAAGACGTCGGCATGCCATGGCTCAAGATA 724154 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 ||| || | ||||||| || || || || || ||||| | ||| | || ||||| || Sbjct 724153 TATAGCGAAGGCACCCGGACGCTTGTTGCCGCCTTGATCGACATAACGAGCGGTGTTGTT 724094 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 | || | ||||| ||| | | ||||| |||| |||||||| ||| ||| || Sbjct 724093 GAAGACGCGTAACATAGGAGTCAATCCGTTGGATGACCCATTTGTGCCACCAATGTAGGA 724034 Query 76846 TCCACATGCACGAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTA 76904 ||| || ||||| | | | | | || || || ||||| || | || ||||| | Sbjct 724033 ACCAGTAGCGCGAATGC-AGTGAACGTTGAGCCCAATACCTCCAGCGTTCTTGGAGATCA 723975 Query 76905 GAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAA 76964 |||||| ||| | ||||| |||||||| || ||||| || || |||| | | | Sbjct 723974 TGGCACAGATTTTGAGAGTGTCGTAGATGCCTTCAATACTGTCCTCTTTCATATCGATGA 723915 Query 76965 GAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCAT 77024 | || ||| | || || || || || || || |||| |||||||| |||| Sbjct 723914 GGAAGCAGGACGCCAACTGTCCTTGCGGTGTACCAGCGTTGAACAGCGTAGGAGAAGCAT 723855 Query 77025 GAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATT 77084 | ||||| | |||| || | || ||||| |||||||| | | ||| || | | Sbjct 723854 GTGTGAAGAACTTTTGGGACATGAGGTTGTAAGTTTCAATCGC--CCTCTCGATGTCGTC 723797 Query 77085 G--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATT 77142 | ||| || || |||| |||||||| | ||| || || |||| ||| ||| || || Sbjct 723796 GCCATGGATGCCCACAGAAACACGCATAAGCATGTGTTGGGGTC--TCT-CAG-CTACTT 723741 Query 77143 ATTTA----TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 77196 |||| | || | | ||||| |||||||||||| || || ||||| | ||| Sbjct 723740 GTTTACCAATCTTGAGGAGATATGAACGTTCCAAAGTTTTGAAGCCGAAATATTGGTAAT 723681 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 ||||| ||||| || || | ||| | || || |||| Sbjct 723680 TGAAA--TCTCTGTCATAGACGATAGCAGAGTTCAGTT 723645 >seq9 Length=1292822 Score = 224 bits (248), Expect = 1e-53 Identities = 562/847 (66%), Gaps = 10/847 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 ||||| || ||||| || || |||||||| || || |||||||| | | || ||||| Sbjct 487334 TTTTGATAGTCACCCACGCGCTTCTCGAAGAAGTTGGTTTTGCCAGCAAGAGAGATATTG 487275 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || ||||| |||||||| |||| || || || | | || Sbjct 487274 TCCATGAAGTCGAAGGGATTCGTAACATTGTAAAACTTGTTGTTGCCAAGAGCAACAAGT 487215 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| ||||| ||||| || || ||||||| | ||||| || | | | Sbjct 487214 AGACGATCAGCAACAAATTCAATGTATTGCTTCATCAAGGTCGAGTTCATGCCGAGCAAT 487155 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 | ||| ||||| || || ||||||||||| || || ||| || || | ||| || Sbjct 487154 GCGCACGGCAGAGCATCAGTGAGAAACTCTTGCTCGATCACGACTGCCTCGGTTATGATG 487095 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | ||| | | || |||| || | | || |||| | || |||||| Sbjct 487094 TCTTCTACCGCCTGCTTTGATGGTCTGTGGTTTAGGTGGGAGAACAAGAGGCAGGCAAAA 487035 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 || ||| || || || || | | || | || || || || ||||| || ||||| Sbjct 487034 TCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAGAAGGTGAGACCTGGCATC 486975 Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758 || |||||||| ||||||||||| | || ||||| || ||||||||||| || || || Sbjct 486974 AGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCAGAAAAGAAGATTCCCTCG 486915 Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTT 46815 || || ||||| || ||||| | | | || | | || || | |||||| | Sbjct 486914 ACGGCTGCGAAGGCAACAAGGCGTTGAGCAAAAGTCGACTCCTTGTCCGAAATCCATCGA 486855 Query 46816 TGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 46875 ||||||| | || ||||| | ||||| || || || || || | || || | Sbjct 486854 AGAGCCCAGTTGGCTTTTTTTCGGATGCAAGGAATGGTGTCAATGGCGTCGAACAGGTAT 486795 Query 46876 tttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGA 46935 | | ||| | || || | || || || || || | ||| ||||| || || ||| Sbjct 486794 TGTCTTTGTTTTGGCTCCTTGATGTACGTGTCAATCAACAAACTGTACATCTCCGAGTGA 486735 Query 46936 ATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995 ||||| || || || ||||| || || || || | || || | || || || || Sbjct 486734 ATGTTCTCCATCATGATTTGAAAGCCATAGAAGCACCGAGCCTCGGGTATTTGGACTTCG 486675 Query 46996 GTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 |||||||||| ||| | ||| ||||| || || |||||||| |||||||| || || Sbjct 486674 CCTGAAAATCGTTC-GACGAGATTTTCATTGACAATGCCATCACTGGCAGCAAAGAAGGC 486616 Query 47055 CAATACATGTTTAATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTGA 47110 | || || | || ||| |||| |||| | || | ||| | ||||||||| Sbjct 486615 AAGGACGTGGGAGACGAAGTATCTTTCGTCATCGTTTAGAC-GTTCACTCCAGTCATGTT 486557 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 ||||||||| | || |||||||| ||||||||||| || || || ||||| ||||||| Sbjct 486556 GATCTTTTGACAGGTCGACTTCTTCTGCTGTCCAGAAAGAAGCTTCGGCTTTCTTATACA 486497 Query 47171 TATTCCA 47177 | | ||| Sbjct 486496 TCTGCCA 486490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934043532800