Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocarpon_20pusillum_20[genbank_20GCA_5F000611755.1_202014-04-02] 40 sequences; 37,173,200 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq9 132 5e-26 >seq9 Length=1292822 Score = 132 bits (146), Expect = 5e-26 Identities = 374/570 (66%), Gaps = 17/570 (3%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| | || |||||||| ||| || || || || | | |||| ||||| || Sbjct 487052 AACAAGAGGCAGGCAAAATCTGTATGCAGACCCTCGTCACGAGAGATCAGCTCATTCGAG 486993 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || | |||||||| | || || || || | |||||| | | || || || || Sbjct 486992 AAGGTGAGACCTGGCATCAGGCCACGCTTCTTGAGCCAAAAGACAGATGCGAAGGAGCCA 486933 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 |||||||| || ||||| || || || ||||| ||||| ||| | |||| || | | Sbjct 486932 GAAAAGAAGATTCCCTCGACGGCTGCGAAGGCAACAAGGCGTTGAGCAAAAGTCGACTCC 486873 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTT---ACACACTCAATTGTT 23736 | || ||||||||| | ||| || || || |||| | || ||| || Sbjct 486872 TTGTCCGAAATCCATCGAAGAGCCCAGTTGGCTTT---TTTTCGGATGCAAGGAATGGTG 486816 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTAT----CTGTTATATATGTATCAAT 23792 ||||| || | || || || || |||| || | | | || || || ||||| Sbjct 486815 TCAATGGCGTCGAACAG----GTATTGTCTTTGTTTTGGCTCCTTGATGTACGTGTCAAT 486760 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 | ||||| ||||| || || ||||| || || || || ||||| ||||| || || Sbjct 486759 CAACAAACTGTACATCTCCGAGTGAATGTTCTCCATCATGATTTGAAAGCCATAGAAGCA 486700 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | ||| || | | ||| || || |||||| || | | |||||| || ||||| Sbjct 486699 CCGAGCCTCGGGTATTTGGACTTCGCCTGAAAATCGTTCGACGAGATTTTCATTGACAAT 486640 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTT 23970 |||||||| ||||||||||| ||||| || | | || | |||||| ||| ||| Sbjct 486639 GCCATCACTGGCAGCAAAGAAGGCAAGGACGTGGGAGACGAAGTATCTTTCGTCATCGTT 486580 Query 23971 GATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | | || |||| |||| ||||||||| | || ||||| || ||||||| || Sbjct 486579 TAGACGTTCACTCCAGTCATGTTGATCTTTTGACAGGTCGACTTCTTCTGCTGTCCAGAA 486520 Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCA 24059 | || ||| ||||||||| |||| Sbjct 486519 AGAAGCTTCGGCTTTCTTATACATCTGCCA 486490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487739256000