Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq53 158 3e-33 >seq53 Length=118516 Score = 158 bits (174), Expect = 3e-33 Identities = 302/437 (69%), Gaps = 10/437 (2%) Strand=Plus/Minus Query 230202 TGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 230260 ||| ||||| || | ||||| || || | ||| |||||||||||||||| || | Sbjct 90175 TGTCGAAGGCATCTTCTTTTCTGG-AGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCGTG 90117 Query 230261 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATC 230320 || ||||||| ||||| | ||||||||| | || ||| || |||||||| || Sbjct 90116 GTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCACA 90057 Query 230321 AACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAG--ACG-G 230377 | || | | || ||| || | || |||||| | || | || || | Sbjct 90056 CTGACTTTGCCTGCCTGTTGTTCTCCCACCT---GAACAACCGCCCTGGCAAGGAACTTG 90000 Query 230378 TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTC 230437 || | |||||||| || || || || | | || ||||||||| | ||| ||| ||| Sbjct 89999 TCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTC 89940 Query 230438 CATGTCGCCTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCC 230496 | || || ||| | |||||||||||||| || ||| ||||| || || ||||| ||| Sbjct 89939 CTTG-CGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTCGTTGCC 89881 Query 230497 GACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCA 230556 ||||| | || || || ||||| |||| || |||||| ||| |||||||| | Sbjct 89880 GACCGTCTCTTAGTGGCCCTTGGCAACGACAAGGTGTACCGTGCTACCAACCCCTTCGAC 89821 Query 230557 TTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGAC 230616 || |||||| |||||| || || ||||||||||| ||||| || ||||| ||||| Sbjct 89820 TTCATGGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGAC 89761 Query 230617 TATCAGAGGCCTGGTGT 230633 || |||| | | ||||| Sbjct 89760 TACCAGAAGGCCGGTGT 89744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057812086587770