Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq53 158 3e-33
>seq53
Length=118516
Score = 158 bits (174), Expect = 3e-33
Identities = 302/437 (69%), Gaps = 10/437 (2%)
Strand=Plus/Minus
Query 230202 TGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 230260
||| ||||| || | ||||| || || | ||| |||||||||||||||| || |
Sbjct 90175 TGTCGAAGGCATCTTCTTTTCTGG-AGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCGTG 90117
Query 230261 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATC 230320
|| ||||||| ||||| | ||||||||| | || ||| || |||||||| ||
Sbjct 90116 GTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCACA 90057
Query 230321 AACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAG--ACG-G 230377
| || | | || ||| || | || |||||| | || | || || |
Sbjct 90056 CTGACTTTGCCTGCCTGTTGTTCTCCCACCT---GAACAACCGCCCTGGCAAGGAACTTG 90000
Query 230378 TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTC 230437
|| | |||||||| || || || || | | || ||||||||| | ||| ||| |||
Sbjct 89999 TCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTC 89940
Query 230438 CATGTCGCCTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCC 230496
| || || ||| | |||||||||||||| || ||| ||||| || || ||||| |||
Sbjct 89939 CTTG-CGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTCGTTGCC 89881
Query 230497 GACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCA 230556
||||| | || || || ||||| |||| || |||||| ||| |||||||| |
Sbjct 89880 GACCGTCTCTTAGTGGCCCTTGGCAACGACAAGGTGTACCGTGCTACCAACCCCTTCGAC 89821
Query 230557 TTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGAC 230616
|| |||||| |||||| || || ||||||||||| ||||| || ||||| |||||
Sbjct 89820 TTCATGGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGAC 89761
Query 230617 TATCAGAGGCCTGGTGT 230633
|| |||| | | |||||
Sbjct 89760 TACCAGAAGGCCGGTGT 89744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057812086587770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |