Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq53 114 1e-20 >seq53 Length=118516 Score = 114 bits (126), Expect = 1e-20 Identities = 341/524 (65%), Gaps = 9/524 (2%) Strand=Plus/Plus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 || || ||||| ||||| || | || ||||| || || || | ||| || || Sbjct 90080 ATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATG 90139 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCC 16357 | ||||| | || |||||||| || || || |||| ||||||||||||| || | Sbjct 90140 GAGGCAAAGGCTCCAGAAAAGAAGATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGA 90199 Query 16358 GCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATA 16417 || | || | ||| | | | ||||| || | |||| |||||||| | ||| Sbjct 90200 GCAAAAGTTGATTCTCTGTCGCAGATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATG 90259 Query 16418 CAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATA---TCGATTATA 16474 || || || || || || || |||| | | | ||| | || | || Sbjct 90260 CAGGGAATGGTGTCAATAGCGTTGAACAGGTACG---TGCGCTGGGCAGGCTCCTTAATG 90316 Query 16475 TACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAAT 16534 || ||||| |||| ||| ||| | || ||||| |||||||| || ||||| || Sbjct 90317 TAAGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAA 90376 Query 16535 CCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTC 16594 ||||||||||| |||||||| | || || || || | | || || || |||||||| Sbjct 90377 CCATAGAAGCAACGAGCCTCAGGGATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTC 90436 Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654 || || || || || ||| |||||||| || |||| ||||| ||||| || | Sbjct 90437 TCGTTGACTATGCCATCAGAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGC 90496 Query 16655 TCGTCAGATGTAA---GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711 ||||| |||| | | | ||| || | | ||||||||||| ||| | || || Sbjct 90497 TCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCA 90556 Query 16712 GGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | ||||| || ||| | ||||| || ||||| | ||| || Sbjct 90557 GCAGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCTGCCAGAT 90600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511408780834280