Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq53 114 1e-20
>seq53
Length=118516
Score = 114 bits (126), Expect = 1e-20
Identities = 341/524 (65%), Gaps = 9/524 (2%)
Strand=Plus/Plus
Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297
|| || ||||| ||||| || | || ||||| || || || | ||| || ||
Sbjct 90080 ATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATG 90139
Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCC 16357
| ||||| | || |||||||| || || || |||| ||||||||||||| || |
Sbjct 90140 GAGGCAAAGGCTCCAGAAAAGAAGATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGA 90199
Query 16358 GCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATA 16417
|| | || | ||| | | | ||||| || | |||| |||||||| | |||
Sbjct 90200 GCAAAAGTTGATTCTCTGTCGCAGATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATG 90259
Query 16418 CAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATA---TCGATTATA 16474
|| || || || || || || |||| | | | ||| | || | ||
Sbjct 90260 CAGGGAATGGTGTCAATAGCGTTGAACAGGTACG---TGCGCTGGGCAGGCTCCTTAATG 90316
Query 16475 TACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAAT 16534
|| ||||| |||| ||| ||| | || ||||| |||||||| || ||||| ||
Sbjct 90317 TAAGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAA 90376
Query 16535 CCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTC 16594
||||||||||| |||||||| | || || || || | | || || || ||||||||
Sbjct 90377 CCATAGAAGCAACGAGCCTCAGGGATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTC 90436
Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654
|| || || || || ||| |||||||| || |||| ||||| ||||| || |
Sbjct 90437 TCGTTGACTATGCCATCAGAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGC 90496
Query 16655 TCGTCAGATGTAA---GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711
||||| |||| | | | ||| || | | ||||||||||| ||| | || ||
Sbjct 90497 TCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCA 90556
Query 16712 GGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
| ||||| || ||| | ||||| || ||||| | ||| ||
Sbjct 90557 GCAGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCTGCCAGAT 90600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511408780834280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |