Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq53 161 1e-34
seq76 86.0 7e-12
>seq53
Length=118516
Score = 161 bits (178), Expect = 1e-34
Identities = 554/852 (65%), Gaps = 14/852 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|| ||||| ||||| |||||||| |||||||| || || || || | | || || ||
Sbjct 89753 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 89812
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATT--CAGAAA 23961
|||||||| ||| | || |||||| || || | ||| | | |||| || ||
Sbjct 89813 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACAC-CTTGTCGTTGCCAAGGGCCACTAA 89871
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 24020
| | || || || ||||| ||||| ||||||| ||| ||||| || | ||
Sbjct 89872 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 89930
Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
| | ||||||||| |||| || || || | ||||| ||| ||||| || ||
Sbjct 89931 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 89989
Query 24081 ATA-GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139
|| | || ||| ||| | || || | | || |||| || || ||
Sbjct 89990 ATTTGCTCGACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAACAGGCAGGC 90048
Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199
|| || ||| |||||||| || | | ||| | ||||| ||||| || || |||||
Sbjct 90049 AAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 90108
Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259
||| || |||||||| |||||||| ||||| ||||| | |||||||||||| || ||
Sbjct 90109 CATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAGATGCC 90168
Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATGTATCCA 24316
||| || || ||||| || || || | | || || | | ||||| |||||
Sbjct 90169 TTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 90228
Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376
||| ||||||| ||||| || || || || || || || ||||| || || ||
Sbjct 90229 CTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 90288
Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436
|| | | | || |||| || ||||| ||||| | | || | || ||
Sbjct 90289 GTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTCGGA 90348
Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496
|| ||||| || || || || || || ||||| || | |||||| | ||||| ||
Sbjct 90349 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 90408
Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556
|| | | || || || | | || || || ||||| || ||| ||| ||||| ||
Sbjct 90409 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAGCAAAGAA 90468
Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAATCATT 24613
|||| | || || || || | ||||| |||| | || ||||| || |
Sbjct 90469 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTG 90528
Query 24614 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673
|| |||||| |||| ||| | || || | ||||| || || ||||| ||||| || ||
Sbjct 90529 GAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTGTA 90588
Query 24674 CATATTCCAGAT 24685
||| | ||||||
Sbjct 90589 CATCTGCCAGAT 90600
>seq76
Length=103561
Score = 86.0 bits (94), Expect = 7e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855
|||| ||| | ||||| || |||||||||| |||| | ||||| |||||||||||
Sbjct 3903 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3844
Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915
|| || || ||||| || |||| || ||| ||||| || || | |||| |
Sbjct 3843 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3784
Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975
|||||| || ||||| |||| || || ||||||||||| || || | || ||
Sbjct 3783 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3724
Query 52976 GCCATTT 52982
|||||||
Sbjct 3723 GCCATTT 3717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593715076483920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |