Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq198 102 1e-16 >seq198 Length=57896 Score = 102 bits (112), Expect = 1e-16 Identities = 187/272 (69%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 |||||| || |||||||| ||| ||||| || | | || ||||| | || ||||| Sbjct 9752 GAGCTGATCGACGCCCTGGCCCGTATAATCCGTTTGAGCATCGACGTATTCCGCGCCGAA 9811 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 || | ||| ||||| || || || || || || || ||| || | ||| || || || Sbjct 9812 ATGGCGCCATTGGAAGCCATACACAGGGCCTAGATCGCCGACATCGCGGTGACCAAGGCC 9871 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCG 146172 | | | ||||||| || || || |||||| ||||||||||||||||||| | || | Sbjct 9872 TACGCTGTCGAGGAACTCGCGCGAACCGTTGCCGTCCCAGATCTTGACGCCGGCGTCACT 9931 Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCC 146232 ||| | | | ||| || ||| ||||||||| || ||||| ||| || | Sbjct 9932 GAGTGGTAGT--GAGGAGGTACTACCCTCGATGAACCAAAGAAGCTCCGCGATGATGGCA 9989 Query 146233 CTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | |||||| | ||||||||| || || || Sbjct 9990 CGGGTGAAGACACGCTTGGTGGTGAGGAGTGG 10021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590070316531160