Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq53 233 2e-56
seq249 125 7e-24
seq404 109 6e-19
seq133 96.9 4e-15
>seq53
Length=118516
Score = 233 bits (258), Expect = 2e-56
Identities = 494/729 (68%), Gaps = 15/729 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| ||||| ||||||||||| | |||||| | || ||
Sbjct 90600 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 90541
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
||||| || | | | ||||||| | || | | | | |||||| | ||||||
Sbjct 90540 TCCAAAGATCTCCA-CGACTGGAACAACCGGCTTACCAAGGACGAGCAGTACTTCATCTC 90482
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | |||||||| || || ||| || ||||| ||||||||||| ||||| |||||
Sbjct 90481 TCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCG 90422
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
|||| || ||||| ||| | | ||||| || |||||||| || || |||||| ||
Sbjct 90421 TTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGAT 90362
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927
||||||| | ||||| || | || || | ||||| || ||| | | || ||
Sbjct 90361 GGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTACATTAAGGAGC-CTG 90303
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| || | | || |||| ||||| || || || || || ||| | || |
Sbjct 90302 CCCAGCGCACGTACC---TGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAG 90246
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
|||| ||||| || |||||| || |||||| | | || | ||||||| | |
Sbjct 90245 CCGACTGGGCTCTCAAGTGGATCTGCGACAGAGAATCAACTTTTGCTCAGCGCCTAATCG 90186
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
| || || || ||||| ||| |||||||||| || || ||| |||| ||||||||
Sbjct 90185 CTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGC 90126
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|| || || || |||||||||||||| || |||||||| || || | || ||||
Sbjct 90125 GCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGG 90066
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
||||||| ||||||||||| || ||||| || || | || || || ||
Sbjct 90065 GTCTGCACACTGACTTTGCCTGCCTGTTGTTCTCCCACCTGAACAACCGCCCTGGCAAGG 90006
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
| ||| | | ||| |||||||||| |||| ||| ||| || ||||| || || |
Sbjct 90005 AACTTGTCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGG 89946
Query 117288 CGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346
| || || ||| || | || || | || || |||| ||| || || ||||||
Sbjct 89945 CTCTTCC-TTGCGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTC 89887
Query 117347 GTCGCCGAC 117355
|| ||||||
Sbjct 89886 GTTGCCGAC 89878
>seq249
Length=46353
Score = 125 bits (138), Expect = 7e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| ||||||||||||||| | || |||||| || ||
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||| || || | ||||| ||||| ||||| | || |||
Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | || ||||| |||||||| || | || |||||| ||||||||||
Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| || |||||| |||| || ||||| ||
Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGT 8323
Score = 111 bits (122), Expect = 2e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| ||||| || || || || ||||||||| | || |||||| || |||| | |
Sbjct 7897 TCGTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTG 7956
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | |||| || || | ||||| ||||| ||||| |||| ||||| || || |
Sbjct 7957 ACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGA 8016
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
| | || ||||| |||||||| || | || |||||| |||||||||||||| ||||
Sbjct 8017 TTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGG 8076
Query 40880 AGGCCACGCTGCATCTAGT 40898
|| |||| || ||||| ||
Sbjct 8077 AGTCCACTCTCCATCTGGT 8095
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| |||||||| | || ||||| | |||||| | | | | |||||
Sbjct 7618 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 7677
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| || || ||||| || ||| | |||||||| || || || | ||| || ||
Sbjct 7678 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 7737
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
|| || || |||| |||||||| |||||||||||||||||||||| | || || ||
Sbjct 7738 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 7797
Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916
|| || | ||| || | || ||
Sbjct 7798 CTGGTCCTCCGCCTGCGTGGTGG 7820
>seq404
Length=24851
Score = 109 bits (120), Expect = 6e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || || |||||| | || || || ||
Sbjct 18271 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 18330
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | ||||| || || | || || |||||||| ||| ||||
Sbjct 18331 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 18390
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || || |||| ||| ||||| ||||| || || | |||||||| |||||||
Sbjct 18391 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTAC 18450
Query 40867 AACATCCAGAAGG 40879
|||||||||||||
Sbjct 18451 AACATCCAGAAGG 18463
>seq133
Length=77988
Score = 96.9 bits (106), Expect = 4e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| | || ||||| || | |||| |
Sbjct 32364 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 32305
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| ||||||| || || ||
Sbjct 32304 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 32246
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | ||||| | |||||||||||||| ||
Sbjct 32245 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAA 32186
Query 40878 GG 40879
||
Sbjct 32185 GG 32184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515213539029040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |