Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq76 96.9 7e-15 >seq76 Length=103561 Score = 96.9 bits (106), Expect = 7e-15 Identities = 389/605 (64%), Gaps = 31/605 (5%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| || ||||| ||||| ||||||||| ||||| | || |||||| Sbjct 2063 TACCAGTACTTTGGCTTTAAAACCTTGGAGCGATCGTATCTGCTCAAGTTGGACGGCAAG 2122 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||||| || || ||||||||| | ||||| || || ||||| || | || ||| Sbjct 2123 ATCGTCGAGCGTCCGCAGCACATGATCATGCGTGTTGCCGTCGGTAT---CTGGGGCGAC 2179 Query 248938 ---ATAGAGAGCGTGCTCGAGACGTACACCGGAATG---AGTGAACGCTGGATGACACAT 248991 | || | |||||||||||||||| | ||| ||| | ||| | ||||| Sbjct 2180 CGTGTCGACCGTGTGCTCGAGACGTACAACTACATGTCCAGT--AAGCT-TTTCACACAC 2236 Query 248992 GCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTT 249051 ||| |||| ||||| |||||||| || || | ||||| || ||||| | Sbjct 2237 GCCTCACCTACGCTGTTCAACGCTGGCACGCCGCAGGCCCAGCTATCGTCATGCTTCTTG 2296 Query 249052 CTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCG 249108 | | |||| | || ||| | || || || || || ||||| | |||| || Sbjct 2297 GTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGA---AGACTTGTGCT 2353 Query 249109 AAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGT 249168 | ||| || || | || || || || || || |||| | ||||| || | || Sbjct 2354 ATGATCTCCAAGATGGCCGGTGGTATTGGCCTGAACGTCCACCGTATCCGCGCCACCGGC 2413 Query 249169 TCGTACATCAAAGGTACAAATGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGATGCT 249226 |||||||| || || || || |||| | || ||||| ||| | || || || Sbjct 2414 TCGTACATTGCTGGCACTAACGGCACGTCA--AACGGCATCGTGCCCATGCTGCGCGTCT 2471 Query 249227 TTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCG 249280 | | ||||||| | | | |||||| || ||||| || | || | Sbjct 2472 TCAACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCC---CTGGAGCCTTTG 2528 Query 249281 CCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACA 249340 | || || | || |||||| |||||| | || |||||||| ||| | |||||| Sbjct 2529 CTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGAACC 2588 Query 249341 ACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGT 249400 ||||||| ||| || | || || ||||| ||| | ||||||| | ||||| ||| Sbjct 2589 ACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACCTGT 2648 Query 249401 TCATG 249405 ||||| Sbjct 2649 TCATG 2653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073754307041472