Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq249 95.1 1e-14 >seq249 Length=46353 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||||||| ||| |||| |||| || Sbjct 7802 ACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCA 7743 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||||||||| || | ||||| ||||| || || | ||||||||| ||| | Sbjct 7742 AGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 7683 Query 45248 ATTTT 45252 || || Sbjct 7682 ATCTT 7678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070967633459