Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq76 479 3e-130
seq53 167 2e-36
seq249 125 6e-24
seq404 82.4 7e-11
>seq76
Length=103561
Score = 479 bits (530), Expect = 3e-130
Identities = 1257/1897 (66%), Gaps = 44/1897 (2%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| |||| ||||| | | ||| || ||||| ||||||||
Sbjct 3901 CTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCC 3842
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
||||| ||||| | |||||| | ||| || || || | ||| || | ||
Sbjct 3841 AGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGG 3782
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| ||||| | || | |||||| ||||||||| || || || |||||||||||
Sbjct 3781 ATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGC 3722
Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344
||| | | | || ||| || |||||||| || |||||||||| | |||| ||
Sbjct 3721 CATTTGCACAACGGTGCGCTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATGTC 3662
Query 22345 TAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
|| || | | | || |||| | || ||||| | | ||||| || ||
Sbjct 3661 GGCAGGGAT--ACTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTCTTC 3604
Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462
|| | |||| ||| | ||||| | || | || | ||| |||| || ||
Sbjct 3603 ATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGACGACC 3544
Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522
|| |||||||| | ||| || || |||||||| |||||||| ||| | || ||||| ||
Sbjct 3543 TGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCAT 3484
Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582
|| ||||| ||||| || |||| ||||||||| || ||||| || || | || ||||||
Sbjct 3483 TCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAG 3424
Query 22583 TTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640
|||| || ||||||| |||| | || || |||||| | |||||||||||| |||
Sbjct 3423 TTTCGCACACCGTGCTGCTTGATCTGTT-CT-TTGAGCGAGGCCCAGTCCCACAGGTCGC 3366
Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCC 22698
|| || ||||| |||||| ||| | |||| | ||| |||| | || |||
Sbjct 3365 TGGGGGTGACATT---CCACATGTCGAACTGCAGAATGCCTTGCGAAACA--GGAGAGCC 3311
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758
|| || || ||| | || | || |||| ||||| || | ||| |
Sbjct 3310 CTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGC 3251
Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAA--TTCGG-CGGCGGC-GACGCTTTCGT 22814
|| || || |||||||| || | ||| |||| | ||| | |||| ||| |||
Sbjct 3250 GTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGAC----TCGA 3195
Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874
| ||||| || | | ||| || || || | ||||||||| || | || || || |
Sbjct 3194 AGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGC 3135
Query 22875 GGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932
||| || ||| | || || ||||||||| ||||| |||| ||||| |
Sbjct 3134 GGTGGCGCATATTG--CTGTTATGAGCCTCGGGCACGGGATAATAATTGACGTCGATGAT 3077
Query 22933 TCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC 22992
| ||||| ||| | || | || || || | ||||| || |
Sbjct 3076 GCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTC 3017
Query 22993 GCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCAC 23049
|||| ||||| | |||||| | ||| | |||||| |||||||| || || ||
Sbjct 3016 GCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGAGGCCAGATTGCACACAGCGAC 2957
Query 23050 CTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCC 23109
||| || || |||||| | || ||||| || || ||| | || |||||
Sbjct 2956 CTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCC 2897
Query 23110 CAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCC 23169
|| || |||||||||| || | ||||| | ||||||||| |||||| |||| | ||
Sbjct 2896 CAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCC 2837
Query 23170 CGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCAC 23229
|||||| || | ||||| ||| || ||| | |||| || | | || |
Sbjct 2836 GGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTTCTGGGCCTTGATG-GTGAGGC 2778
Query 23230 GTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGT 23288
| | | ||| || ||||||||||| ||||| || || || ||| ||||||| ||||
Sbjct 2777 GGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGT 2718
Query 23289 CGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGC 23348
||||||| ||||| | | | || |||||||| |||| | | || || || || |
Sbjct 2717 CGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACAC 2658
Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408
| |||| || || || || ||||| || || |||||| |||||||| || | |||||
Sbjct 2657 GCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCT 2598
Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468
| |||||| |||||| | || | || || || || || |||||||||||||| |
Sbjct 2597 CCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTA 2538
Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528
|||| | ||||| || || || | ||| ||||| ||||| || || || ||||| ||||
Sbjct 2537 GGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGT 2478
Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588
||||| | || | ||||| ||||||| ||||| |||| |||| ||| || |
Sbjct 2477 TGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGT 2418
Query 23589 TCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648
||| || | || || | ||| |||| | || || || ||| || || || |
Sbjct 2417 ACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGA 2358
Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708
|||| || || ||||| || |||||||| ||||| |||||||| || || | |||
Sbjct 2357 TCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGA 2298
Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768
||||||| || || || | || || | ||||| | || |||||| || || ||
Sbjct 2297 CCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGG 2238
Query 23769 CGTGCGT--AAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGC---GGCATCAA 23822
|||| || |||| | | | ||||| ||| |||||||| |||| | | | ||
Sbjct 2237 CGTGTGTGAAAAGCTT--ACTGGACATGTAG-TTGTACGTCTCGAGCACACGGTCGACAC 2181
Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882
||| | | | ||||||| ||| || ||||| ||||||| || || | ||||||
Sbjct 2180 GGTCGCCCCAG---ATACCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGACGA 2124
Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942
| ||||| | |||| |||||| || || | || |||||||| ||||| || | |
Sbjct 2123 TCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCAAGGTTTTAAAGCCAAAGTACTGGT 2064
Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|||||||||||||||||| ||| ||||| || | |||
Sbjct 2063 AGTTAAAGTCACGATCGTACACGATGGCAGAGTCCAA 2027
>seq53
Length=118516
Score = 167 bits (184), Expect = 2e-36
Identities = 410/613 (67%), Gaps = 18/613 (3%)
Strand=Plus/Minus
Query 57694 TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC 57753
|||| || || || || || ||||| || || |||||||| |||| || | || ||
Sbjct 90473 TGGCCTTCTTTGCTGCCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCGTTTCTCTG 90414
Query 57754 AAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813
|| || || | | ||||| | ||||| || || || || | || || |||
Sbjct 90413 GCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAACA 90354
Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAA-A 57872
| || || || | || || | | |||||||| ||| | ||||| | | || |
Sbjct 90353 TCCACTCCGAGACCTACTCTTTGTTGATCGATACTTACATTAAGGAGCCTGCCCAGCGCA 90294
Query 57873 CGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAGAGTGGTC 57931
|||| ||||||||||| || || || || ||| || |||| ||| | || ||| |
Sbjct 90293 CGTAC-CTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAGCC-GACTGGGC 90236
Query 57932 AATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGC 57988
|||| ||||| ||| || | | || || || || | |||||||| || ||
Sbjct 90235 TCTCAAGTGGATCT---GCGACAGAGAATCAACTTTTGCTCAGCGCCTAATCGCTTTTGC 90179
Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048
|| |||||||| || |||||||| || |||||| | || |||||| || || ||
Sbjct 90178 TGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCG 90119
Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108
|| ||||||||||||||||| ||| |||||| |||| || || || |||||||| ||
Sbjct 90118 TGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCA 90059
Query 58109 TACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC---GC-GGGATC 58164
||||| ||||| ||||| ||| ||| ||| | | ||||| | || ||| |
Sbjct 90058 CACTGACTTTGCCTGCCTGTTGTTCTCCCACCT----GAACAACCGCCCTGGCAAGGAAC 90003
Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224
|| | | || |||||||| || |||| || || || ||||| | || || || |
Sbjct 90002 TTGTCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTC 89943
Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284
| || | | ||||| |||||| ||| ||||| |||| |||||||| ||||
Sbjct 89942 TTCCTTGCGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTCGTTG 89883
Query 58285 CCGACAGACTTTT 58297
||||| | || ||
Sbjct 89882 CCGACCGTCTCTT 89870
>seq249
Length=46353
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||||| || |||||||| |||||| | || || ||| | |||
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | |||||| || || |||||||| || | || || || |||
Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||| ||| |||| || || | ||| || |||
Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || ||||| |||||||| ||| | ||| | || ||||
Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGGTA 8343
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||||| || |||||||| |||||| | || ||||| | ||
Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | |||||| || || || ||||| || | || || || |||
Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATCAG 8462
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||| |||||||| || | ||| | || || |||
Sbjct 8463 CAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAAC 8522
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| ||||| || || || || |||||||| ||
Sbjct 8523 ATCCAAAAGGAGTCTACCCTACATCTGGTTCT 8554
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| || || || || || || || |||||| | || || ||| | ||||| | | | |
Sbjct 7897 TCGTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTG 7956
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | |||||| || || |||||||| || | || || || ||||||||||| |
Sbjct 7957 ACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGA 8016
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| || || ||||| ||| |||| || || | || || ||||| ||||| |
Sbjct 8017 TTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGG 8076
Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| || ||||| |||||||| ||| | ||| | || ||||
Sbjct 8077 AGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGGTA 8115
>seq404
Length=24851
Score = 82.4 bits (90), Expect = 7e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||||||| | || ||||| |
Sbjct 18271 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 18330
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| | || ||| ||||| ||| | || || ||
Sbjct 18331 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 18390
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||||| || || ||||||||||| ||| | || ||
Sbjct 18391 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGA 18428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761502141680
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