Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq76 479 3e-130 seq53 167 2e-36 seq249 125 6e-24 seq404 82.4 7e-11 >seq76 Length=103561 Score = 479 bits (530), Expect = 3e-130 Identities = 1257/1897 (66%), Gaps = 44/1897 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| ||||| | | ||| || ||||| |||||||| Sbjct 3901 CTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCC 3842 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| | ||| || || || | ||| || | || Sbjct 3841 AGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGG 3782 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | || | |||||| ||||||||| || || || ||||||||||| Sbjct 3781 ATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGC 3722 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | || ||| || |||||||| || |||||||||| | |||| || Sbjct 3721 CATTTGCACAACGGTGCGCTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATGTC 3662 Query 22345 TAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 || || | | | || |||| | || ||||| | | ||||| || || Sbjct 3661 GGCAGGGAT--ACTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTCTTC 3604 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462 || | |||| ||| | ||||| | || | || | ||| |||| || || Sbjct 3603 ATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGACGACC 3544 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 || |||||||| | ||| || || |||||||| |||||||| ||| | || ||||| || Sbjct 3543 TGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCAT 3484 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || ||||| ||||| || |||| ||||||||| || ||||| || || | || |||||| Sbjct 3483 TCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAG 3424 Query 22583 TTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640 |||| || ||||||| |||| | || || |||||| | |||||||||||| ||| Sbjct 3423 TTTCGCACACCGTGCTGCTTGATCTGTT-CT-TTGAGCGAGGCCCAGTCCCACAGGTCGC 3366 Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCC 22698 || || ||||| |||||| ||| | |||| | ||| |||| | || ||| Sbjct 3365 TGGGGGTGACATT---CCACATGTCGAACTGCAGAATGCCTTGCGAAACA--GGAGAGCC 3311 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758 || || || ||| | || | || |||| ||||| || | ||| | Sbjct 3310 CTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGC 3251 Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAA--TTCGG-CGGCGGC-GACGCTTTCGT 22814 || || || |||||||| || | ||| |||| | ||| | |||| ||| ||| Sbjct 3250 GTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGAC----TCGA 3195 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | ||||| || | | ||| || || || | ||||||||| || | || || || | Sbjct 3194 AGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGC 3135 Query 22875 GGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932 ||| || ||| | || || ||||||||| ||||| |||| ||||| | Sbjct 3134 GGTGGCGCATATTG--CTGTTATGAGCCTCGGGCACGGGATAATAATTGACGTCGATGAT 3077 Query 22933 TCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC 22992 | ||||| ||| | || | || || || | ||||| || | Sbjct 3076 GCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTC 3017 Query 22993 GCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCAC 23049 |||| ||||| | |||||| | ||| | |||||| |||||||| || || || Sbjct 3016 GCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGAGGCCAGATTGCACACAGCGAC 2957 Query 23050 CTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCC 23109 ||| || || |||||| | || ||||| || || ||| | || ||||| Sbjct 2956 CTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCC 2897 Query 23110 CAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCC 23169 || || |||||||||| || | ||||| | ||||||||| |||||| |||| | || Sbjct 2896 CAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCC 2837 Query 23170 CGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCAC 23229 |||||| || | ||||| ||| || ||| | |||| || | | || | Sbjct 2836 GGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTTCTGGGCCTTGATG-GTGAGGC 2778 Query 23230 GTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGT 23288 | | | ||| || ||||||||||| ||||| || || || ||| ||||||| |||| Sbjct 2777 GGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGT 2718 Query 23289 CGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGC 23348 ||||||| ||||| | | | || |||||||| |||| | | || || || || | Sbjct 2717 CGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACAC 2658 Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408 | |||| || || || || ||||| || || |||||| |||||||| || | ||||| Sbjct 2657 GCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCT 2598 Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468 | |||||| |||||| | || | || || || || || |||||||||||||| | Sbjct 2597 CCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTA 2538 Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528 |||| | ||||| || || || | ||| ||||| ||||| || || || ||||| |||| Sbjct 2537 GGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGT 2478 Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588 ||||| | || | ||||| ||||||| ||||| |||| |||| ||| || | Sbjct 2477 TGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGT 2418 Query 23589 TCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648 ||| || | || || | ||| |||| | || || || ||| || || || | Sbjct 2417 ACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGA 2358 Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708 |||| || || ||||| || |||||||| ||||| |||||||| || || | ||| Sbjct 2357 TCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGA 2298 Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768 ||||||| || || || | || || | ||||| | || |||||| || || || Sbjct 2297 CCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGG 2238 Query 23769 CGTGCGT--AAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGC---GGCATCAA 23822 |||| || |||| | | | ||||| ||| |||||||| |||| | | | || Sbjct 2237 CGTGTGTGAAAAGCTT--ACTGGACATGTAG-TTGTACGTCTCGAGCACACGGTCGACAC 2181 Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882 ||| | | | ||||||| ||| || ||||| ||||||| || || | |||||| Sbjct 2180 GGTCGCCCCAG---ATACCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGACGA 2124 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | ||||| | |||| |||||| || || | || |||||||| ||||| || | | Sbjct 2123 TCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCAAGGTTTTAAAGCCAAAGTACTGGT 2064 Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 |||||||||||||||||| ||| ||||| || | ||| Sbjct 2063 AGTTAAAGTCACGATCGTACACGATGGCAGAGTCCAA 2027 >seq53 Length=118516 Score = 167 bits (184), Expect = 2e-36 Identities = 410/613 (67%), Gaps = 18/613 (3%) Strand=Plus/Minus Query 57694 TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC 57753 |||| || || || || || ||||| || || |||||||| |||| || | || || Sbjct 90473 TGGCCTTCTTTGCTGCCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCGTTTCTCTG 90414 Query 57754 AAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 || || || | | ||||| | ||||| || || || || | || || ||| Sbjct 90413 GCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAACA 90354 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAA-A 57872 | || || || | || || | | |||||||| ||| | ||||| | | || | Sbjct 90353 TCCACTCCGAGACCTACTCTTTGTTGATCGATACTTACATTAAGGAGCCTGCCCAGCGCA 90294 Query 57873 CGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAGAGTGGTC 57931 |||| ||||||||||| || || || || ||| || |||| ||| | || ||| | Sbjct 90293 CGTAC-CTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAGCC-GACTGGGC 90236 Query 57932 AATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGC 57988 |||| ||||| ||| || | | || || || || | |||||||| || || Sbjct 90235 TCTCAAGTGGATCT---GCGACAGAGAATCAACTTTTGCTCAGCGCCTAATCGCTTTTGC 90179 Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048 || |||||||| || |||||||| || |||||| | || |||||| || || || Sbjct 90178 TGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCG 90119 Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108 || ||||||||||||||||| ||| |||||| |||| || || || |||||||| || Sbjct 90118 TGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCA 90059 Query 58109 TACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC---GC-GGGATC 58164 ||||| ||||| ||||| ||| ||| ||| | | ||||| | || ||| | Sbjct 90058 CACTGACTTTGCCTGCCTGTTGTTCTCCCACCT----GAACAACCGCCCTGGCAAGGAAC 90003 Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224 || | | || |||||||| || |||| || || || ||||| | || || || | Sbjct 90002 TTGTCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTC 89943 Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284 | || | | ||||| |||||| ||| ||||| |||| |||||||| |||| Sbjct 89942 TTCCTTGCGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTCGTTG 89883 Query 58285 CCGACAGACTTTT 58297 ||||| | || || Sbjct 89882 CCGACCGTCTCTT 89870 >seq249 Length=46353 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||||| || |||||||| |||||| | || || ||| | ||| Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | |||||| || || |||||||| || | || || || ||| Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| |||| || || | ||| || ||| Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || ||||| |||||||| ||| | ||| | || |||| Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGGTA 8343 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || |||||||| |||||| | || ||||| | || Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | |||||| || || || ||||| || | || || || ||| Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATCAG 8462 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| |||||||| || | ||| | || || ||| Sbjct 8463 CAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAAC 8522 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || || |||||||| || Sbjct 8523 ATCCAAAAGGAGTCTACCCTACATCTGGTTCT 8554 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| || || || || || || || |||||| | || || ||| | ||||| | | | | Sbjct 7897 TCGTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTG 7956 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | |||||| || || |||||||| || | || || || ||||||||||| | Sbjct 7957 ACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGA 8016 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || || ||||| ||| |||| || || | || || ||||| ||||| | Sbjct 8017 TTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGG 8076 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || ||||| |||||||| ||| | ||| | || |||| Sbjct 8077 AGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGGTA 8115 >seq404 Length=24851 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||||||| | || ||||| | Sbjct 18271 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 18330 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | || ||| ||||| ||| | || || || Sbjct 18331 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 18390 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||| || || ||||||||||| ||| | || || Sbjct 18391 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGA 18428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761502141680