Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq53 156 6e-33
seq76 86.0 8e-12
>seq53
Length=118516
Score = 156 bits (172), Expect = 6e-33
Identities = 376/566 (66%), Gaps = 6/566 (1%)
Strand=Plus/Plus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| || || || || || ||| |||||||| || | | ||| | ||||| |||
Sbjct 90035 AACAACAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAA 90094
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || |||||||| || |||||||| |||||||| ||||| ||||| | ||||
Sbjct 90095 AAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCA 90154
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CA 36325
|||||||| || ||||| || || ||||| || || || | || || || | |
Sbjct 90155 GAAAAGAAGATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCT 90214
Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 36385
||||| |||||||| ||||||| ||||| || || || || || || ||
Sbjct 90215 CTGTCGCAGATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCA 90274
Query 36386 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 36445
||||| || || || || | | | || |||| || ||||| ||||| | |
Sbjct 90275 ATAGCGTTGAACAGGTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAA 90334
Query 36446 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 36505
|| | || || || ||||| || || || || || || ||||| || | ||||
Sbjct 90335 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCC 90394
Query 36506 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 36565
|| | ||||| || || | | || || || | | || || || ||||| || |||
Sbjct 90395 TCAGGGATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCA 90454
Query 36566 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGT-GTTAGT 36622
||| ||||| || |||| | || || || || | |||| ||||| |
Sbjct 90455 GAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGG 90514
Query 36623 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 36682
|| ||||| || | || |||||| |||| ||| | || || | ||||| || || |||
Sbjct 90515 TTGTTCCAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCC 90574
Query 36683 TCTGCCTTTTTATACATATTCCAGAT 36708
|| ||||| || ||||| | ||||||
Sbjct 90575 TCAGCCTTCTTGTACATCTGCCAGAT 90600
>seq76
Length=103561
Score = 86.0 bits (94), Expect = 8e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886
|||| ||| | ||||| || |||||||||| |||| | ||||| |||||||||||
Sbjct 3903 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3844
Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946
|| || || ||||| || |||| || ||| ||||| || || | |||| |
Sbjct 3843 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3784
Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006
|||||| || ||||| |||| || || ||||||||||| || || | || ||
Sbjct 3783 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3724
Query 65007 GCCATTT 65013
|||||||
Sbjct 3723 GCCATTT 3717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658165568326360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |