Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq53 178 2e-39
seq76 104 3e-17
>seq53
Length=118516
Score = 178 bits (196), Expect = 2e-39
Identities = 558/853 (65%), Gaps = 16/853 (2%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| ||||| |||||||| |||||||| || ||||| || ||| || || ||
Sbjct 89753 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 89812
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 41891
|||||||| || || || |||||| || || | || | | |||| || ||
Sbjct 89813 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 89871
Query 41892 TCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 41950
| | || || | ||| || ||||| ||||||| ||| ||||| || | ||
Sbjct 89872 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 89930
Query 41951 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 42010
| | ||||||||| |||| || || || | ||||| ||| ||||| || ||
Sbjct 89931 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 89989
Query 42011 ATA-GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069
|| | || ||| ||| | || || | | || |||| || || ||
Sbjct 89990 ATTTGCTCGACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAACAGGCAGGC 90048
Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129
|| || ||||||||||||||| | | ||| | ||||| ||||| || || |||||
Sbjct 90049 AAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 90108
Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189
||| || |||||||| |||||||| || || ||||| | ||||||||||||||| ||
Sbjct 90109 CATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAGATGCC 90168
Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCA 42246
||| || || ||||| || || || | || || || | | ||||| |||||
Sbjct 90169 TTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 90228
Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306
||| ||||||| ||||| || || || || || || || || || || || ||
Sbjct 90229 CTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 90288
Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366
|| | | | || |||| || ||||||||||| | | || | || ||
Sbjct 90289 GTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTCGGA 90348
Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426
|| ||||| || || ||||| || || ||||| || | ||||| | | ||| ||
Sbjct 90349 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 90408
Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486
|| | | || || ||| | | || ||||| ||||| || ||| ||| ||||| ||
Sbjct 90409 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAGCAAAGAA 90468
Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCAATCAT 42542
|||| | || || || || | |||||| || ||| || ||||| || |
Sbjct 90469 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCC-TTGGTAAGCCGGTTGTTCCAGTCGT 90527
Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602
|| |||||| |||| ||| | || || | ||||| || || || || ||||| || |
Sbjct 90528 GGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTGT 90587
Query 42603 ACATATTCCAGAT 42615
|||| | ||||||
Sbjct 90588 ACATCTGCCAGAT 90600
>seq76
Length=103561
Score = 104 bits (114), Expect = 3e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||| ||||||| || ||||| | ||||| ||||||||||||
Sbjct 3903 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3844
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || ||||| || |||| || ||| ||||| || || | |||| | ||
Sbjct 3843 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3784
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
||||| ||||| || |||| |||||| ||||||||||| || || | || ||
Sbjct 3783 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3724
Query 70969 GCCATTT 70975
|||||||
Sbjct 3723 GCCATTT 3717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671131825858040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |