Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq249 102 7e-17 >seq249 Length=46353 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || |||||||||||||| ||||| || | | || | | ||||||||||| || || Sbjct 8311 GTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCG 8252 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| |||| || | ||||||||| || | ||||| ||||| || ||| ||| Sbjct 8251 GCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTG 8192 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGT-TTCGACGGTAATGGTTTTACCTGTTAAAGT 19023 || | | | | ||||||| ||| | || ||| | ||| |||||||| || || | ||| Sbjct 8191 ACATTGTCAATAGTATCGG-AGGATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGT 8133 Query 19024 TTTGACAAAAATTTGCAT 19041 ||||||||||||||||| Sbjct 8132 CTTGACAAAAATTTGCAT 8115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414568358759326