Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq249 102 7e-17
>seq249
Length=46353
Score = 102 bits (112), Expect = 7e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
|| |||||||||||||| ||||| || | | || | | ||||||||||| || ||
Sbjct 8311 GTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCG 8252
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
||| |||| || | ||||||||| || | ||||| ||||| || ||| |||
Sbjct 8251 GCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTG 8192
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGT-TTCGACGGTAATGGTTTTACCTGTTAAAGT 19023
|| | | | | ||||||| ||| | || ||| | ||| |||||||| || || | |||
Sbjct 8191 ACATTGTCAATAGTATCGG-AGGATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGT 8133
Query 19024 TTTGACAAAAATTTGCAT 19041
|||||||||||||||||
Sbjct 8132 CTTGACAAAAATTTGCAT 8115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414568358759326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |