Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq249 114 3e-20 >seq249 Length=46353 Score = 114 bits (126), Expect = 3e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || ||||| || || || | |||||| || ||||| ||||| Sbjct 7790 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCG 7731 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || |||||||| | ||| || || || || || || || |||||||||||||| | || Sbjct 7730 GCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTCGACTTG 7671 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || | ||| ||| || || ||||| || || || ||||| || || Sbjct 7670 ACATTGTCGATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 7618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151385432735332