Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq249 114 3e-20
>seq249
Length=46353
Score = 114 bits (126), Expect = 3e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||| || || || | |||||| || ||||| |||||
Sbjct 7790 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCG 7731
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| |||||||| | ||| || || || || || || || |||||||||||||| | ||
Sbjct 7730 GCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTCGACTTG 7671
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| || | ||| ||| || || ||||| || || || ||||| || ||
Sbjct 7670 ACATTGTCGATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 7618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151385432735332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |