Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq167 107 2e-18
>seq167
Length=66338
Score = 107 bits (118), Expect = 2e-18
Identities = 124/165 (75%), Gaps = 4/165 (2%)
Strand=Plus/Minus
Query 5327 ATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCG--CTGTTTCCGAAGTTAA 5384
|||||||| || || | ||||||| ||||| ||||||||| || || || || |
Sbjct 27990 ATTAGCTGGGCAATACGATCTCCCTCCTTAATCTCAAAGTCCGCCTCGTTGTGA--TTGA 27933
Query 5385 ACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGA 5444
|||| | ||| ||| | ||| ||||| || |||| ||||| |||||||| |||||
Sbjct 27932 ACAGAAGAACCTTGACCTCGCCGCGGTAATCGGCGTCAATAACACCAGCGCCAGTGTCGA 27873
Query 5445 TAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489
| ||||| ||| | |||||||||||||| || || ||||| ||||
Sbjct 27872 TGAAGTGCTTGGCAGCAAGGCCGGAACGAGGAGCGATGCGGCCGT 27828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447745480342480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |