Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq249 93.3 4e-14 >seq249 Length=46353 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || ||| |||||||||||||||||| || | | || | ||||||||||| Sbjct 8318 ATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTG 8259 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | |||| | |||||||||||| || | || |||||||| || || Sbjct 8258 CTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTT 8199 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 | |||| | | || ||||||| || || || | || |||||||| || || Sbjct 8198 CGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTGCCAGT 8139 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 |||||| || |||||||| ||||| Sbjct 8138 GAGAGTCTTGACAAAAATTTGCAT 8115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246687214879