Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq249 102 7e-17
>seq249
Length=46353
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| || | ||| || |||||||| | ||| || ||| | || | |||||||
Sbjct 8323 ACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCC 8264
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| |||| || | | |||||||||||||| ||||| || ||||| |
Sbjct 8263 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGG 8204
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||| | | | ||| || | | ||||| || | |||||||||||
Sbjct 8203 ATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTG 8144
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| || ||||| || |||||
Sbjct 8143 CCAGTGAGAGTCTTGACAAAAATTTGCAT 8115
Score = 98.7 bits (108), Expect = 9e-16
Identities = 165/237 (70%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||||| ||||| | || |||| |||| || | ||||| |||||||| | ||| |
Sbjct 8577 TTTACTGGCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGT 8518
Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890
| || | || || || |||||||| ||| || ||| |||| || | | |||||
Sbjct 8517 AGTCAG--AGAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTG 8460
Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950
|||||| |||||||| || || || | || || | ||||| | | | ||| ||||
Sbjct 8459 ATCTGGGGGAATACCCTCCTTATCTTGGATCTTCGATTTGACATTGTCAATAGTATCAGA 8400
Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || |||| ||||||||||| ||||| ||||| || || ||||| |||||
Sbjct 8399 AGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || || | || || | |||| || | ||| || |||||||| |
Sbjct 8126 AAAAATTTGCATACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGGAT 8067
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || | || | |||||||||||| || ||| |||| || | | ||
Sbjct 8066 GTTGTAGTCAGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTG 8007
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||| ||||| ||||| || ||||| | || || | ||||| | | | ||| ||
Sbjct 8006 CTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATC 7947
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995
| | ||||| || | |||||||| ||||| ||||| ||||| ||
Sbjct 7946 GGAGGATTCGACTTCTAGGGTGATGGTCTTTCCGGTAAGGGTTTTGAC 7899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448286274400440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |