Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq195 181 2e-41
seq8 109 9e-20
>seq195
Length=58616
Score = 181 bits (200), Expect = 2e-41
Identities = 203/269 (75%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || || || ||||| || |
Sbjct 8444 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATTCAGGGTATTACTAAGCCCGCCA 8386
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| || ||||||||||| ||||||||| | |||| || | || || ||||
Sbjct 8385 TCCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATATACGAGGAGA 8326
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| | |||| | ||| ||||||| || || |||| |||||| || ||| || |
Sbjct 8325 CTCGCGGTGTTCTTAAGTCCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACTG 8266
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||||| ||||| ||||||| || | || | ||||
Sbjct 8265 AGCACGCCAAGCGCAAGACCGTCACCTCGCTGGATGTCGTCTACGCCCTCAAGAGACAAG 8206
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| || |||||
Sbjct 8205 GCCGTACCCTGTACGGTTTCGGTGGTTAA 8177
>seq8
Length=190646
Score = 109 bits (120), Expect = 9e-20
Identities = 87/102 (85%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| ||||
Sbjct 37948 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 37890
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| || ||||| |||||||||||||| ||||||||| | ||||
Sbjct 37889 TTCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 37848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074396324147
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |