Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq76 363 4e-95 seq53 95.1 3e-14 >seq76 Length=103561 Score = 363 bits (402), Expect = 4e-95 Identities = 1020/1550 (66%), Gaps = 28/1550 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || ||| ||| ||||| || | | | ||| | || || Sbjct 2228 TTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACGCCGCAGGCCCAGCTATCGTCA 2287 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | |||||||| || ||| |||||||||| || || || |||| | Sbjct 2288 TGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGAAGACT 2347 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 |||||| | || ||||||| || || || ||||| | | || ||||| | | || || Sbjct 2348 TGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTGAACG-TCCACCGTATCCGCGC 2406 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | || ||||| ||||| || || || || | || |||||||| | Sbjct 2407 CACCGGCTCGT-ACATTGCTGGCACTAACGGCACGTCAAACGGCATCGTGCCCATGCTGC 2465 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | || || |||| || || | || || ||||||||||| |||||| || || | Sbjct 2466 GCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCCCTGGAGCCT 2525 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 ||||||| || || ||||| ||||||||| | || ||||| || || || || || | Sbjct 2526 TTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGA 2585 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | ||||| || || |||||| || || ||| || | |||| Sbjct 2586 ACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACC 2645 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | || ||| ||||| | ||||| |||| || Sbjct 2646 TGTTCATGAAGCGTGTCGAG--AAGAACGCCAACTGGACACTCATGTGCCCCAACGAGTG 2703 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 || ||||| |||| | |||||||| | | ||||| ||||||||||| || Sbjct 2704 CCCCGGTCTGGCCGACTGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAG 2763 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||||| | || || || || ||||||||||||| |||||| | || | Sbjct 2764 CGAGGGCCGCGGCCGCCTCACCATCAAGGCCCAGAAGCTATGGTACGCCATCCTCGAGGC 2823 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 || | ||||| |||| || | ||| ||||||| ||| | |||||| | ||| ||| Sbjct 2824 CCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAA 2883 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACA 364261 |||| || |||| || || | || |||| |||||| || |||||||| || || ||| Sbjct 2884 CCAGAAGAACCTGGGCACTA-TCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACT 2942 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-- 364319 ||| || || ||| || || || || || || ||| | || || ||| ||||||| Sbjct 2943 GCGCCCCTGATGAGGTCGCTGTGTGCAATCTGGCCTCGCTGGCCCTACCGTCGTTTGTCG 3002 Query 364320 ----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTAC 364373 || | || | |||| |||| | || | || | ||| | || | | | Sbjct 3003 ATTACAACAAGGGCGAGTATGACTTCCAGAAGCTGCACGAGATCACCAAGGTCGTCGTGC 3062 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 |||| || || | |||||| ||||||||||| | || || || | Sbjct 3063 --GCAACCTGAACCGCATCATCGACGTCAATTATTATCCCGTGCCCGAGGCTCATAACAG 3120 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 |||||||| || ||||| ||||| ||||||| ||||| || || || | || | Sbjct 3121 CAATATGCGCCACCGCCCTATTGGAGTTGGTGTTCAGGGTCTAGCCGATGCCTTCCT--A 3178 Query 364494 GCTCAA--GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 |||| | ||| | || || || | || || || || |||||| |||| || || Sbjct 3179 GCTCTACGCATGCCCTTCGAGTCTGCCGAGGCCCGCACGCTGAATAAGCAGATTTTCGAG 3238 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611 || || || ||||| | ||||| ||||| || | || | ||| | || | ||| Sbjct 3239 ACCATCTACCACGCCGCCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAAGGCACCTAC 3298 Query 364612 TCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671 || || |||||||| || ||| ||||||| || | | ||||| || | ||||||||| Sbjct 3299 TCGACCTATGAGGGCTCTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGTGGAATGTC 3358 Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTA 364729 || || | || ||| |||||| |||| | | | | | ||| |||| ||| Sbjct 3359 ACCCCCAGCGACCTGTGGGACTGGGCCTCGCTCAAAGAAC--AGATCAAGCAGCACGGTG 3416 Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789 || ||||| || | ||| |||||||| || ||||| || | || ||||| || | Sbjct 3417 TGCGAAACTCGCTGCTCCTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGGGCA 3476 Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849 ||||||| |||||||| || | || ||| | || ||| || || | | || | Sbjct 3477 ACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAACGTCGTGTGTTGGCTGGCG 3536 Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909 | || | ||| || || | || | ||| || ||||| ||| || ||| | Sbjct 3537 AGTTCCAGGTCGTCAACCCCTGGCTGCTGCGGGACCTAGTCGACCTCGGTCTTTGGTCCG 3596 Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969 | |||||||||| ||||||| || || ||||| | ||||||||||| | | | Sbjct 3597 ATGCCATGAAGAACCGTATCATCAGCGACAACGGTTCGATTCAGAACATTCCCAGTATCC 3656 Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029 | | || | ||| | | ||||| || || |||||||| ||| ||| || | | Sbjct 3657 CTGCCGACATCAAGGCCTTGTACAAGACTGTCTGGGAAATCTCCCAGCGCACCGTTGTGC 3716 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 | ||||| |||||||| || ||||| ||| |||| |||||| | ||| Sbjct 3717 AAATGGCCGCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAAC 3766 >seq53 Length=118516 Score = 95.1 bits (104), Expect = 3e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 || || || || ||||||| || |||||||| |||||||||||||| ||| | ||| Sbjct 90195 CGCCTAATCGCTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATC 90136 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 |||||||| || |||| | ||||| || || || ||||| || ||| | ||| Sbjct 90135 TTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCT 90076 Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 || ||||||||||| || || || ||||| || Sbjct 90075 CGTGATGAGGGTCTGCACACTGACTTTGCCTG 90044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303338921387378