Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq76 363 4e-95
seq53 95.1 3e-14
>seq76
Length=103561
Score = 363 bits (402), Expect = 4e-95
Identities = 1020/1550 (66%), Gaps = 28/1550 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| | || || ||| ||| ||||| || | | | ||| | || ||
Sbjct 2228 TTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACGCCGCAGGCCCAGCTATCGTCA 2287
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | | |||||||| || ||| |||||||||| || || || |||| |
Sbjct 2288 TGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGAAGACT 2347
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
|||||| | || ||||||| || || || ||||| | | || ||||| | | || ||
Sbjct 2348 TGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTGAACG-TCCACCGTATCCGCGC 2406
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | || ||||| ||||| || || || || | || |||||||| |
Sbjct 2407 CACCGGCTCGT-ACATTGCTGGCACTAACGGCACGTCAAACGGCATCGTGCCCATGCTGC 2465
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
| || || |||| || || | || || ||||||||||| |||||| || || |
Sbjct 2466 GCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCCCTGGAGCCT 2525
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
||||||| || || ||||| ||||||||| | || ||||| || || || || || |
Sbjct 2526 TTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGA 2585
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || ||||| | ||||| || || |||||| || || ||| || | ||||
Sbjct 2586 ACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACC 2645
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022
|| |||||||| || ||| | | | | || ||| ||||| | ||||| |||| ||
Sbjct 2646 TGTTCATGAAGCGTGTCGAG--AAGAACGCCAACTGGACACTCATGTGCCCCAACGAGTG 2703
Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082
|| ||||| |||| | |||||||| | | ||||| ||||||||||| ||
Sbjct 2704 CCCCGGTCTGGCCGACTGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAG 2763
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
||||| | || || || || ||||||||||||| |||||| | || |
Sbjct 2764 CGAGGGCCGCGGCCGCCTCACCATCAAGGCCCAGAAGCTATGGTACGCCATCCTCGAGGC 2823
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
|| | ||||| |||| || | ||| ||||||| ||| | |||||| | ||| |||
Sbjct 2824 CCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAA 2883
Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACA 364261
|||| || |||| || || | || |||| |||||| || |||||||| || || |||
Sbjct 2884 CCAGAAGAACCTGGGCACTA-TCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACT 2942
Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-- 364319
||| || || ||| || || || || || || ||| | || || ||| |||||||
Sbjct 2943 GCGCCCCTGATGAGGTCGCTGTGTGCAATCTGGCCTCGCTGGCCCTACCGTCGTTTGTCG 3002
Query 364320 ----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTAC 364373
|| | || | |||| |||| | || | || | ||| | || | | |
Sbjct 3003 ATTACAACAAGGGCGAGTATGACTTCCAGAAGCTGCACGAGATCACCAAGGTCGTCGTGC 3062
Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433
|||| || || | |||||| ||||||||||| | || || || |
Sbjct 3063 --GCAACCTGAACCGCATCATCGACGTCAATTATTATCCCGTGCCCGAGGCTCATAACAG 3120
Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493
|||||||| || ||||| ||||| ||||||| ||||| || || || | || |
Sbjct 3121 CAATATGCGCCACCGCCCTATTGGAGTTGGTGTTCAGGGTCTAGCCGATGCCTTCCT--A 3178
Query 364494 GCTCAA--GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551
|||| | ||| | || || || | || || || || |||||| |||| || ||
Sbjct 3179 GCTCTACGCATGCCCTTCGAGTCTGCCGAGGCCCGCACGCTGAATAAGCAGATTTTCGAG 3238
Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611
|| || || ||||| | ||||| ||||| || | || | ||| | || | |||
Sbjct 3239 ACCATCTACCACGCCGCCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAAGGCACCTAC 3298
Query 364612 TCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671
|| || |||||||| || ||| ||||||| || | | ||||| || | |||||||||
Sbjct 3299 TCGACCTATGAGGGCTCTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGTGGAATGTC 3358
Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTA 364729
|| || | || ||| |||||| |||| | | | | | ||| |||| |||
Sbjct 3359 ACCCCCAGCGACCTGTGGGACTGGGCCTCGCTCAAAGAAC--AGATCAAGCAGCACGGTG 3416
Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789
|| ||||| || | ||| |||||||| || ||||| || | || ||||| || |
Sbjct 3417 TGCGAAACTCGCTGCTCCTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGGGCA 3476
Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849
||||||| |||||||| || | || ||| | || ||| || || | | || |
Sbjct 3477 ACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAACGTCGTGTGTTGGCTGGCG 3536
Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909
| || | ||| || || | || | ||| || ||||| ||| || ||| |
Sbjct 3537 AGTTCCAGGTCGTCAACCCCTGGCTGCTGCGGGACCTAGTCGACCTCGGTCTTTGGTCCG 3596
Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969
| |||||||||| ||||||| || || ||||| | ||||||||||| | | |
Sbjct 3597 ATGCCATGAAGAACCGTATCATCAGCGACAACGGTTCGATTCAGAACATTCCCAGTATCC 3656
Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029
| | || | ||| | | ||||| || || |||||||| ||| ||| || | |
Sbjct 3657 CTGCCGACATCAAGGCCTTGTACAAGACTGTCTGGGAAATCTCCCAGCGCACCGTTGTGC 3716
Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079
| ||||| |||||||| || ||||| ||| |||| |||||| | |||
Sbjct 3717 AAATGGCCGCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAAC 3766
>seq53
Length=118516
Score = 95.1 bits (104), Expect = 3e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
|| || || || ||||||| || |||||||| |||||||||||||| ||| | |||
Sbjct 90195 CGCCTAATCGCTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATC 90136
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|||||||| || |||| | ||||| || || || ||||| || ||| | |||
Sbjct 90135 TTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCT 90076
Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
|| ||||||||||| || || || ||||| ||
Sbjct 90075 CGTGATGAGGGTCTGCACACTGACTTTGCCTG 90044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303338921387378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |