Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq76 244 1e-59 seq249 140 3e-28 seq53 104 2e-17 seq404 100 3e-16 seq133 98.7 9e-16 >seq76 Length=103561 Score = 244 bits (270), Expect = 1e-59 Identities = 866/1333 (65%), Gaps = 49/1333 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| |||||||||||||| || | ||| || ||| |||| Sbjct 3552 TTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGC 3493 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| |||||||||||||||| ||||| || || |||||| || | Sbjct 3492 TCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGG 3433 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || || |||| ||||||| |||||| | ||| || |||| |||| ||||| Sbjct 3432 AGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCAC 3373 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | || | || | |||||||||| |||||| |||||| | | || | Sbjct 3372 AGGTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAG 3313 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | | ||| ||| |||| || | || | |||||| || || ||| Sbjct 3312 CCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCG 3253 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 || || || |||||| ||| ||| | || ||| || || | |||| | Sbjct 3252 GCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCGAAG 3193 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 |||||||| || || || |||||||| || ||||| | || || || || || || Sbjct 3192 GGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGG 3133 Query 145478 TGTTTCATGTTGC-----TCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 || ||| |||| | | ||||| | | || ||||| ||| |||||| | Sbjct 3132 TGGCGCATATTGCTGTTATGAGCCTCG--GGCACG---GGATAATAATTGACGTCGATGA 3078 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAAC- 145591 | |||| ||| ||||| || ||||| || || | ||| ||| | |||||| || Sbjct 3077 TGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACT 3018 Query 145592 CGAGC--CTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649 || | | || | ||| || || | | | ||| | ||| |||| ||| || || | Sbjct 3017 CGCCCTTGTTGTAATCGA-CAAACGACGGT--AGGGCCAGCGAGGCCAGATTGCACACAG 2961 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | ||| || | | ||| ||| | | |||||||| ||||| ||| | ||| | Sbjct 2960 CGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATAG 2901 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | ||||| || | ||| || || ||||||||||| || |||||||| |||||| |||| Sbjct 2900 TGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGT 2841 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTG 145827 || ||||| || | ||| | ||| || || || | ||| || | || Sbjct 2840 TTCCGGTCTCGGTTTGGGCCTCGAGGAT--GGCGTACCATAGCTTCTGGGC-----CTTG 2788 Query 145828 CTGCT-----GGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882 || | || ||||||||| ||||| || ||| || |||| ||| || | Sbjct 2787 ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCA 2728 Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942 |||||||| |||| ||| ||||| |||| |||||| ||||| || | ||| | |||| Sbjct 2727 CCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTC 2668 Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCT 146002 | ||| |||| ||| |||| || || | |||||| || | || |||||| || Sbjct 2667 TTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCA 2608 Query 146003 TTGCAATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTG 146061 ||||| || ||| | || | | | || | | ||| || || || Sbjct 2607 CGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGA-AGACATCGGCATG 2549 Query 146062 CCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTG 146118 |||||| || | |||| || | |||||| || |||||||||||||| || | Sbjct 2548 CCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATA 2489 Query 146119 ACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT 146178 || | ||||||| |||||||||| ||||||| ||| |||| | | |||||| || Sbjct 2488 GCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCCGTTAGT 2429 Query 146179 ---AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGC 146234 || | | || | |||| || ||| | | || || |||| ||| | ||| | Sbjct 2428 GCCAGCAATGTA----CGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACCAC 2373 Query 146235 CGCCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTA 146293 || | |||||| || || | |||| | ||||| |||||||| || |||||||| Sbjct 2372 CGGCCATCTTGGAGATCATAGCACAAGTCTTC-AGCGTATCGTAGATACCCTCAATGCTG 2314 Query 146294 TC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCG 146351 || |||| ||| ||| || ||||| || | | ||| ||| |||||| || || Sbjct 2313 TCATCCTTC--ATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGCCAGCGT 2256 Query 146352 AGAACAACGTCGG 146364 ||||| ||| || Sbjct 2255 TGAACAGCGTAGG 2243 >seq249 Length=46353 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | || |||||||||||||||||||| ||| Sbjct 8341 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAG 8282 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || | || | ||||||||| || |||||| Sbjct 8281 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGG 8222 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| |||| | || | |||||||| ||| |||| Sbjct 8221 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACT 8162 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || || ||||| || || ||||| ||||| Sbjct 8161 TCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | || ||||||||||| |||||||| || Sbjct 8113 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAG 8054 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || | || | ||||||||| ||||||||| Sbjct 8053 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGG 7994 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| |||| | || | |||||||| ||| |||| Sbjct 7993 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACT 7934 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || ||||| || ||||| |||| Sbjct 7933 TCTAGGGTGATGGTCTTTCCGGTAAGGGTTTTGACGA 7897 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||| || | ||||| ||| ||||||||||| |||||||| || Sbjct 8570 GCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 8511 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| | ||||||||| || | || | ||||||||| || || || Sbjct 8510 GAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGG 8451 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| ||| |||| | || | |||||| | ||||| | Sbjct 8450 AATACCCTCCTTATCTTGGATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAAC 8391 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || || ||||| || ||||| || ||||| Sbjct 8390 CTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | || |||||||| || |||||||| ||| | Sbjct 7820 CCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7761 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || ||||| || ||| | |||| |||||||||||| || || Sbjct 7760 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGA 7701 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||||| | || | || |||| ||||||| Sbjct 7700 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACC 7641 Query 131188 TCGACGGTAACGGTTTTACCGGTTA 131212 || | || | ||| || ||||||| Sbjct 7640 TCAAGAGTGATGGTCTTGCCGGTTA 7616 >seq53 Length=118516 Score = 104 bits (114), Expect = 2e-17 Identities = 336/515 (65%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || ||| | ||| ||| |||||||||| | ||||||||| | ||| | Sbjct 90267 ATTCCCTGCATACGCCGCAAAGCCGACTGGGCTCTCAAGTGGATCTGCGACAGAGAATCA 90208 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 ||||| || |||| | | || ||||| ||| || ||| |||| |||||||| Sbjct 90207 ACTTTTGCTCAGCGCCTAATCGCTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCC 90148 Query 46204 TTTGCCGCCATCTTTTACAT-CAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 |||||| ||||||||| | | || | || | | |||||||||||||| ||| || Sbjct 90147 TTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTC-TGATGCCCGGCCTGACCTTTTCTAA 90089 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 ||||||||| || || || ||||| ||||| || |||||||| || || | | | | Sbjct 90088 CGAGCTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTGCCTGCCTGTTGT---TCTC 90032 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGC--ATGTTCAAGGAGGCGGTG 46380 | | || || || | || || | | | || |||| || ||| || || || Sbjct 90031 CCACCTGAACAACCGCCCTG-GCAAG-GAACTTGTCGAGCAAATCATCACCGACGCCGTC 89974 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCA 46440 | ||||||||||||||| | || | || || || | | || ||||||||||| Sbjct 89973 GTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAACGCT 89914 Query 46441 CAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAG 46500 | ||| | || || ||||| || || ||||| || | ||| ||| | | Sbjct 89913 GACCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCTCTTAGTGGCCCTTGGCAAC 89854 Query 46501 CCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560 ||| | | || ||| || || || || ||| | ||||| || |||| |||| Sbjct 89853 GACAAGGTGTACCGTGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGC 89794 Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || |||||||| || || || || || || Sbjct 89793 AAGACCAACTTTTTCGAGAAACGTGTTGGTGACTA 89759 >seq404 Length=24851 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||||||||||||||| ||| ||| Sbjct 18463 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGA 18404 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||| || ||||| || || || || || || ||| || ||||| | | Sbjct 18403 TCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGT 18344 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||| | || | ||| | || ||||| || || || || |||| Sbjct 18343 CGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGA 18284 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 18283 AAATCTGCAT 18274 >seq133 Length=77988 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 ||||||| |||||||| || || ||||| ||||| ||||||||||| ||| ||| Sbjct 32184 CCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 32243 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||| |||||||| || || || || ||||| ||| || ||||| | | Sbjct 32244 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGT 32303 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||||| ||| ||||| || || || || |||| Sbjct 32304 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 32363 Query 131225 AA 131226 || Sbjct 32364 AA 32365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007613759360