Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq610 131 1e-25
seq21 125 5e-24
>seq610
Length=7921
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 1910 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 1851
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 1850 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 1816
>seq21
Length=160800
Score = 125 bits (138), Expect = 5e-24
Identities = 219/314 (70%), Gaps = 6/314 (2%)
Strand=Plus/Minus
Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG-- 6231
||||| || | |||| | ||| ||||||||| ||||| ||||| || ||| |
Sbjct 63772 AACGTCAACCCCGATGTTACCGACCAGTTCTACCGTTACAAGATGCCCCG--TCTTCAAA 63715
Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291
| ||| |||||||||| || || ||||| || || |||||||||||| || ||| ||||
Sbjct 63714 CTAAGATCGAGGGTAAAGGTAATGGTATCAAGACTGTCATTGTCAACCTGTCTGCCGTCG 63655
Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351
| || |||| | ||||||| | ||| || || || ||||| | ||| || || |
Sbjct 63654 CCCAGTCGCTGGCTCGCCCTGGTGCTCACCTGATCAAGTACTTCGGTTTCGAGCTGGGTG 63595
Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411
| ||||| | |||||| | || |||| ||| | ||||| || ||| || |
Sbjct 63594 CCCAGACCAATATTGATCCTCCGGATGATCGCTGGATCATCAACGGTTCACATGACACAA 63535
Query 6412 CCAAGCTGCAGGACTTAC-TTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470
||||||||||| | || | ||||||| ||| ||||||||| || || | | |||
Sbjct 63534 AGAAGCTGCAGGA-TCACGTCTACGGCTTCATTGTCAAGTTTGTTCTCTGCAAGAAGTGC 63476
Query 6471 GATAACCCGGAGAC 6484
| ||||| |||||
Sbjct 63475 AAGAACCCCGAGAC 63462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943611773449
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |