Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq610 131 1e-25 seq21 125 5e-24 >seq610 Length=7921 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct 1910 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 1851 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1850 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 1816 >seq21 Length=160800 Score = 125 bits (138), Expect = 5e-24 Identities = 219/314 (70%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG-- 6231 ||||| || | |||| | ||| ||||||||| ||||| ||||| || ||| | Sbjct 63772 AACGTCAACCCCGATGTTACCGACCAGTTCTACCGTTACAAGATGCCCCG--TCTTCAAA 63715 Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291 | ||| |||||||||| || || ||||| || || |||||||||||| || ||| |||| Sbjct 63714 CTAAGATCGAGGGTAAAGGTAATGGTATCAAGACTGTCATTGTCAACCTGTCTGCCGTCG 63655 Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351 | || |||| | ||||||| | ||| || || || ||||| | ||| || || | Sbjct 63654 CCCAGTCGCTGGCTCGCCCTGGTGCTCACCTGATCAAGTACTTCGGTTTCGAGCTGGGTG 63595 Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411 | ||||| | |||||| | || |||| ||| | ||||| || ||| || | Sbjct 63594 CCCAGACCAATATTGATCCTCCGGATGATCGCTGGATCATCAACGGTTCACATGACACAA 63535 Query 6412 CCAAGCTGCAGGACTTAC-TTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470 ||||||||||| | || | ||||||| ||| ||||||||| || || | | ||| Sbjct 63534 AGAAGCTGCAGGA-TCACGTCTACGGCTTCATTGTCAAGTTTGTTCTCTGCAAGAAGTGC 63476 Query 6471 GATAACCCGGAGAC 6484 | ||||| ||||| Sbjct 63475 AAGAACCCCGAGAC 63462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943611773449