Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq53 165 1e-35 seq76 114 2e-20 >seq53 Length=118516 Score = 165 bits (182), Expect = 1e-35 Identities = 555/852 (65%), Gaps = 14/852 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 || ||||| ||||| |||||||| |||||||| || || || || | | || || || Sbjct 89753 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 89812 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 32487 |||||||| ||||| || |||||| || || | || | | |||| || || Sbjct 89813 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 89871 Query 32488 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 32546 | | || || || || || ||||| ||||||| ||| ||||| || | || Sbjct 89872 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 89930 Query 32547 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 32606 | | ||||||||| |||| || || || | ||||| ||| ||||| || || Sbjct 89931 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 89989 Query 32607 ATA-GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 || | || ||| ||| | || || | | || |||| || || || Sbjct 89990 ATTTGCTCGACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAACAGGCAGGC 90048 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || ||| |||||||| || | | ||| | ||||| ||||| || || ||||| Sbjct 90049 AAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 90108 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| || |||||||| |||||||| ||||| ||||| | |||||||||||| || || Sbjct 90109 CATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAGATGCC 90168 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 32842 ||| || || ||||| || || || | || || || | | ||||| ||||| Sbjct 90169 TTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 90228 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 ||| ||||||| ||||| || || || || || || || ||||| || || || Sbjct 90229 CTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 90288 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 32962 || | | | || |||| || ||||| ||||| | | || | || || Sbjct 90289 GTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTCGGA 90348 Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || ||||| || || || || || || |||||||| | |||||| | ||||| || Sbjct 90349 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 90408 Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 || | | || || || | | || || || ||||| || ||| ||| ||||| || Sbjct 90409 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAGCAAAGAA 90468 Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAATCATT 33139 |||| | || || || || | ||||| |||| | || ||||| || | Sbjct 90469 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTG 90528 Query 33140 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199 || |||||| |||| ||| | || || | ||||| || || ||||| ||||| || || Sbjct 90529 GAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTGTA 90588 Query 33200 CATATTCCAGAT 33211 ||| | |||||| Sbjct 90589 CATCTGCCAGAT 90600 >seq76 Length=103561 Score = 114 bits (126), Expect = 2e-20 Identities = 452/703 (64%), Gaps = 16/703 (2%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | | | |||| || || || || | || ||||| | | | Sbjct 2739 TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTC 2680 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || | ||| | || || || ||||| || || || |||||||| || |||| || Sbjct 2679 CAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAAC 2620 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | || | | ||||| || || ||||| || ||||||||| | | Sbjct 2619 AGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAG 2560 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||| | ||||||||| || | ||| || || | ||||||| || ||||| || ||| Sbjct 2559 ACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCC 2500 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | || | |||||||| || | || | || ||| || | || || || || Sbjct 2499 TGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGAC 2440 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 || || || || || | || || || |||| || ||| | || || Sbjct 2439 GTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCA 2380 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412 || || || ||||| || ||||| | || || || | |||||| ||||| ||||| Sbjct 2379 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCA 2320 Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG---TGACGACTAGTT 63469 || || |||||| |||||| | | || || || | ||| || || | || Sbjct 2319 ATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTG-CGGC--GTG 2263 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGT-AAACCATTTTTCAGAAAGTAGATTGTA 63528 || || || || | ||||| || ||||| || ||| || | | |||| ||||| Sbjct 2262 CCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAG-TTGTA 2204 Query 63529 CGTCTCAATAGCTGAGTCTATA---TC-CCATTGATGAATTCCTACTGCGACACGCATTA 63584 |||||| | | ||| | | || || | || || || || |||||||| | Sbjct 2203 CGTCTCGAGCACACGGTCGACACGGTCGCCCCAG----ATACCGACGGCAACACGCATGA 2148 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 ||||||||| || | || ||||||||| || | || | || || ||| |||| Sbjct 2147 TCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCA 2088 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63687 | |||||||| ||||| || | ||| |||||| || ||||| Sbjct 2087 AGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTA 2045 Score = 86.0 bits (94), Expect = 8e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||| || |||||||||| |||| | ||||| ||||||||||| Sbjct 3903 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3844 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 || || || ||||| || |||| || ||| ||||| || || | |||| | Sbjct 3843 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3784 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 |||||| || ||||| |||| || || ||||||||||| || || | || || Sbjct 3783 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3724 Query 62018 GCCATTT 62024 ||||||| Sbjct 3723 GCCATTT 3717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625037968400