Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq249 105 6e-18 >seq249 Length=46353 Score = 105 bits (116), Expect = 6e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || ||| ||||||| | || || ||||| ||| Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || || || ||| || || || || ||||| || || | Sbjct 8403 GATACTATTGA--CAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATC 8460 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | |||||||||||||| || || || |||| ||| ||| | || |||| Sbjct 8461 AGCAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACA 8520 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || || |||||| | || || Sbjct 8521 ACATCCAAAAGGAGTCTACCCTACATCTGGTTCT 8554 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || ||| ||||||| | ||||| || || || Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || || || ||| ||||| || || || || || || | Sbjct 8175 GATACTATTGA--CAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATC 8232 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | |||||||||||||| || | || |||| || || | ||| |||| Sbjct 8233 AGCAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACA 8292 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | |||||||| || ||||| || ||| | || || Sbjct 8293 ACATTCAAAAGGAGTCCACTCTCCATCTGGTTCT 8326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323357838385