Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq249 105 6e-18
>seq249
Length=46353
Score = 105 bits (116), Expect = 6e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | || || ||| ||||||| | || || ||||| |||
Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || || || ||| || || || || ||||| || || |
Sbjct 8403 GATACTATTGA--CAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATC 8460
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | |||||||||||||| || || || |||| ||| ||| | || ||||
Sbjct 8461 AGCAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACA 8520
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || ||||| || || || |||||| | || ||
Sbjct 8521 ACATCCAAAAGGAGTCTACCCTACATCTGGTTCT 8554
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | || || ||| ||||||| | ||||| || || ||
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || || || ||| ||||| || || || || || || |
Sbjct 8175 GATACTATTGA--CAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATC 8232
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | |||||||||||||| || | || |||| || || | ||| ||||
Sbjct 8233 AGCAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACA 8292
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| |||||||| || ||||| || ||| | || ||
Sbjct 8293 ACATTCAAAAGGAGTCCACTCTCCATCTGGTTCT 8326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433323357838385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |