Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq249 154 3e-32 seq404 150 3e-31 seq133 143 5e-29 seq53 104 4e-17 >seq249 Length=46353 Score = 154 bits (170), Expect = 3e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | ||||| || || |||| |||| ||||| || ||||| ||||||||||| | Sbjct 8577 TTTACTGGCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGT 8518 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | || ||||| || | ||||| || |||||||| ||||| || || || | || || | Sbjct 8517 AGTCAGAGAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGAT 8458 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||| || ||||| ||||| ||||| | ||||| || || || || | | Sbjct 8457 CTGGGGGAATACCCTCCTTATCTTGGATCTTCGATTTGACATTGTCAATAGTATCAGAAG 8398 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || | |||||||||||| || ||||| ||||||||||| || ||||| Sbjct 8397 ACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || |||||||| ||||| ||||| || |||||| Sbjct 8341 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAG 8282 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || || || || || Sbjct 8281 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGG 8222 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | ||||| || || || || | ||||| ||| Sbjct 8221 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACT 8162 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||||||| || ||||| |||||||| || || ||||| Sbjct 8161 TCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || |||||||| ||||||||||| || || ||| Sbjct 8113 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAG 8054 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || || || || || Sbjct 8053 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGG 7994 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | ||||| || || || || | ||||| ||| Sbjct 7993 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACT 7934 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| ||||| || ||||| ||||||| Sbjct 7933 TCTAGGGTGATGGTCTTTCCGGTAAGGGTTTTGACGA 7897 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || ||||| Sbjct 7820 CCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7761 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | || ||||| || ||| Sbjct 7760 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGA 7701 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | |||||| ||||||||||| | || || || Sbjct 7700 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACC 7641 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||||| || || || Sbjct 7640 TCAAGAGTGATGGTCTTGCCGGT 7618 >seq404 Length=24851 Score = 150 bits (166), Expect = 3e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| |||| |||||| || ||||| || Sbjct 18461 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 18402 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | ||||| || || |||||||| ||||| || || ||||| | |||||| ||| Sbjct 18401 AGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTCG 18342 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||||| || || || || | |||||| || || ||||| |||||||||||||| Sbjct 18341 ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAAA 18282 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 18281 ATCTGCAT 18274 >seq133 Length=77988 Score = 143 bits (158), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||||||||| || || || | || | ||||| || | |||||| || ||||| || Sbjct 32186 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 32245 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || |||||||| ||||||||||| ||||| | ||||||| ||| Sbjct 32246 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 32305 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||| ||| ||||| || ||||| |||||||||||||| Sbjct 32306 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 32364 >seq53 Length=118516 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 || || ||||||||||| || || || |||||| ||||||| ||||||| | || Sbjct 89744 ACACCGGCCTTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGA 89803 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 |||||| |||||||||||| |||||||| || | || |||| || || || Sbjct 89804 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGG 89863 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 || || | ||||| || |||||||| || ||||| |||||||||| | ||||||| Sbjct 89864 GCCACTAAGAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATG 89923 Query 10119 CC 10120 || Sbjct 89924 CC 89925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921612273673880