Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq76 407 3e-108 seq53 304 2e-77 >seq76 Length=103561 Score = 407 bits (450), Expect = 3e-108 Identities = 1234/1887 (65%), Gaps = 67/1887 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| ||| ||||||||| ||| | ||| ||||||||||| |||||||| | Sbjct 3890 TGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGAC 3831 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTT--GAGCTTTGGGTC 243858 || ||| | | ||||||| || | || ||| | || |||| Sbjct 3830 CAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGGATCTTT----- 3776 Query 243859 GTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTG 243917 || || ||| || ||||| ||| |||| ||| | |||| || || | Sbjct 3775 ---------CATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAG-CGCCACGATCGG 3726 Query 243918 CGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976 ||||||| | | ||| | ||| || || || | | |||||||| | || |||| Sbjct 3725 CGGCCATTTGCACAACGGTGCG-CTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTG 3667 Query 243977 AGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036 | || | |||| | |||||||| | ||| || |||| | ||||| || | Sbjct 3666 ATGTCGGCAGGGATACTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTC 3607 Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTC 244093 |||| |||| ||| || || | | | || || || ||| ||| | || Sbjct 3606 TTCATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCC-CG--CAGCAGCCAGGGGTTG 3550 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | || ||| || || ||||||| |||| || |||||| Sbjct 3549 ACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCG 3490 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || || |||||||||| || || | || ||||| |||||||| | | ||| Sbjct 3489 AAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGC 3430 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 || ||| | ||| |||||| || ||| | | ||||| | ||||||||||| Sbjct 3429 AGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCACA-- 3372 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA-C 244332 |||| | | ||| ||||||||| |||||||| | || |||| | | Sbjct 3371 -------GGTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGCC-TTGCGAAAC 3320 Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTC 244392 || |||||| ||||||| ||||| || ||| ||| || | || || | Sbjct 3319 AGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGT 3260 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 |||||||||| ||||||||||||||| ||| ||| |||| |||||||| | | | Sbjct 3259 TAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGA 3200 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 |||||| |||| | | |||| | ||||| || ||||| || || | || || Sbjct 3199 CTCGAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAAT 3140 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATG-GCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 || | ||| ||| | ||| | ||| || ||||||||||| ||| | ||| |||||| Sbjct 3139 AGGGCGGTGGCGCATATTGCTGTT-ATGAGCCTCGGGCACGGGATAATAATTGACGTCGA 3081 Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631 | | ||| |||||||| || | | || ||| |||| ||| ||||| | Sbjct 3080 TGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCAT 3021 Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACT-CGTTGAGGGCGACGCTGGCC 244690 ||||| ||| | | || ||| |||||| || | ||||| | |||| Sbjct 3020 ACTCGC------CCTTG----TTGTAATCG--ACAAACGACGGT-AGGGCCAGCGAGGCC 2974 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 || ||||| || || ||||| || | | | ||||| || ||||||||||| ||||| Sbjct 2973 AGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTG 2914 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 || ||| |||||||||| || || ||| ||| ||||||||| |||||||| Sbjct 2913 GAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAC 2854 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870 |||||||| || ||||||||| ||||| |||||| | || ||| || | | Sbjct 2853 AGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTTCTGG 2794 Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930 ||||||| || ||| | |||||| |||||| |||||| ||||||||| Sbjct 2793 GCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAAC 2734 Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 ||| || || ||| | || ||||||||| ||||||||||| |||| | | Sbjct 2733 TCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTG 2674 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 || | || ||| | || |||||| |||||||| ||||| ||||| |||| ||||| Sbjct 2673 GCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCG 2614 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 | || | ||| ||| ||| |||||| | || || | || || ||||| ||| Sbjct 2613 CGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCG 2554 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170 | ||||| ||||| | ||||| ||| | ||| || || ||||||||||| ||||||| Sbjct 2553 GCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGT-- 2496 Query 245171 ACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226 || | | || ||| |||||||| |||||| | ||||| |||||||| || Sbjct 2495 --CAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGT 2438 Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAG 245286 |||||| ||||| ||||| | ||| || | | || | || | || ||| | Sbjct 2437 GCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAAT 2378 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 || ||||| ||||||||| | || || |||| | || || || ||||| || Sbjct 2377 ACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAAT 2318 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 |||||| |||||||| || || ||||| || || ||||||| || || ||| | Sbjct 2317 GCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGCCAGC 2258 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGC-GGCTCGAGAGGAACCCGTACGTCT 245465 ||||||||| || || |||||| || || ||| || || | | | |||||||| Sbjct 2257 GTTGAACAGCGTAGGTGAGGCGTGTGTGAA-AAGCTTACTGGACATGTAGTTGTACGTCT 2199 Query 245466 GGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 ||||| | ||||| |||||| ||| | ||| | ||||| |||||| Sbjct 2198 CGAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCT 2139 Query 245526 GGGGCGTCTCGATGGGTCCCTCGGGTCC--CTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 | || ||||| | | | |||| |||||||| || || ||||| | || || Sbjct 2138 GCGGACGCTCGA--CGATCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCAAGGTTTT 2081 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTC 245610 || ||||||||| |||| |||||| Sbjct 2080 AAAGCCAAAGTACTGGTAGTTAAAGTC 2054 >seq53 Length=118516 Score = 304 bits (336), Expect = 2e-77 Identities = 598/867 (69%), Gaps = 42/867 (5%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| || ||||||||||| || Sbjct 90600 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 90541 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 |||| || || |||| | || | || | | |||| ||| ||| || Sbjct 90540 TCCAAAGATCTCCACGACTGGAACA-ACCGGCTTACCAAGGACGAGCAGTACTTCATCTC 90482 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| ||||||||||| || |||||||| ||||||||||| |||||||||| | Sbjct 90481 TCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCG 90422 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| ||||| ||| | |||||| || |||||||| || |||||||| || Sbjct 90421 TTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGAT 90362 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| | || || | || ||||| ||| || | Sbjct 90361 GGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTACATTAAGGAGCCTGC 90302 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAG-AAGGCGG 42654 | |||| | |||||||| || || || || || |||||||| | | | || || | Sbjct 90301 CCAGCGCACGTACCTGTTCAACGCTATTGACACCATTCCCTGCAT-ACGCCGCAAAGCCG 90243 Query 42655 ACTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711 ||||||| ||||| ||||| ||| || || |||| || | || | || | | Sbjct 90242 ACTGGGCTCTCAAGTGGATCTGCGACAG---AGAATCAACTTTTGCTCAGCGCCTAATCG 90186 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT-- 42769 | ||| | || ||||| ||||||||||| || || ||||| ||||||||||| ||||| Sbjct 90185 CTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGC 90126 Query 42770 -CAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 ||||| ||| | ||||||||| || ||||| || ||||| || || | || | Sbjct 90125 GCAAGC--GTGGTCT-GATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATG 90069 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCC 42886 |||| ||||| | |||||||||||||| ||||||| |||||| | |||| ||| Sbjct 90068 AGGGTCTGCACACTGACTTTGCCTGCCTGTTGTTCTC---CCACCT---GAACAACCGCC 90015 Query 42887 CTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC 42945 || | ||||| | ||| | |||||||| || ||||| | || ||||||||||||| Sbjct 90014 CTGGCAAGGAACTTGTCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCC 89955 Query 42946 TCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGT 43002 | || || | || || || || | ||||||||||| ||||| ||| ||| Sbjct 89954 TGACTGAGGCTCTTCCTTGCG-GT--TTACTCGGCATGAACGCTGACCTGATGAAGCAGT 89898 Query 43003 ACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGC---CTCTAC 43058 | || ||| ||| ||||||| |||| | ||| | ||| || | | | ||| Sbjct 89897 ATATTGAGTTCGTTGCCGACCGTCTCTTAGTGGCCCTTGG----CAACGACAAGGTGTAC 89842 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 | | |||||||||||| ||||||||||| || ||| |||||||||||||||| Sbjct 89841 CGTGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGCAAGACCAACTTT 89782 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| || || | ||||||||| Sbjct 89781 TTCGAGAAACGTGTTGGTGACTACCAG 89755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944328824073040