Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq53 120 7e-22
seq86 91.5 3e-13
>seq53
Length=118516
Score = 120 bits (132), Expect = 7e-22
Identities = 306/455 (67%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGAAGGTATTCTGTTTTCCGGGAGTTT 243347
|||||| |||| || |||| | | ||| || ||||| || | ||||| || || |
Sbjct 90204 TTTGCTCAGCGCCTAATCGCTTTTGC-TGCTGTCGAAGGCATCTTCTTTTCTGG-AGCCT 90147
Query 243348 CTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 243406
||| |||||||||||||||| || ||| ||||||| ||||| | |||||||
Sbjct 90146 TTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACG 90087
Query 243407 AGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGC 243466
|| | || ||| || ||||| || ||| | || | || ||| || | |
Sbjct 90086 AGCTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTGCCTGCCTGTTGTTCTCCCACC 90027
Query 243467 TCCAGAACAAGCTACCATTCGA--AACG-GTCAAACAAATCATCACAGAAGCAGTTGAAA 243523
| |||||| | || | | ||| ||| | ||||||||||| || || || | |
Sbjct 90026 T---GAACAACCGCCCTGGCAAGGAACTTGTCGAGCAAATCATCACCGACGCCGTCGTCA 89970
Query 243524 ACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTA-TTGGCATGAACTCTGAA 243582
|| ||||| ||| | || ||| |||| || ||| ||| | ||||||||| ||||
Sbjct 89969 TTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTG-CGGTTTACTCGGCATGAACGCTGAC 89911
Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642
|| ||| ||||| || || ||||| |||||||| | || | || ||||| | ||
Sbjct 89910 CTGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCTCTTAGTGGCCCTTGGCAACGAC 89851
Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702
|| |||||| | | |||||||| | ||| |||||| |||||| || || ||
Sbjct 89850 AAGGTGTACCGTGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGCAAG 89791
Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
|| ||||| ||||| || ||||| |||| || ||
Sbjct 89790 ACCAACTTTTTCGAGAAACGTGTTGGTGACTACCA 89756
>seq86
Length=98809
Score = 91.5 bits (100), Expect = 3e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241
||||| || |||| ||| |||| || || ||||| ||||| || || || | |||
Sbjct 85318 GGGAATCCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTAGACTTTCCAGAACCG 85377
Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301
||||| || || ||||||||||| | |||||||| ||| | | || | ||| |||
Sbjct 85378 TTTGGACCGCAAAGACCGTAGCGCTGGCCACGCTTTAGACGCAGGTGGGTCTGGTTGAGA 85437
Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || || ||||| || || | ||||||||||||||
Sbjct 85438 AGAATCTTAGCACCGTAGGCGAGAGAGAAAGTGCAGTTGCACAGATCCTCACC 85490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102867579158650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |