Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq76 230 3e-55 seq298 86.0 7e-12 >seq76 Length=103561 Score = 230 bits (254), Expect = 3e-55 Identities = 836/1297 (64%), Gaps = 25/1297 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||| ||||| ||||| || ||||| |||| |||||| | ||| || Sbjct 3513 TAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAA 3454 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || |||||||| || | ||| || ||| || | ||| | | | | || |||| Sbjct 3453 GCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCT 3394 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 114120 ||||| | | ||||||| | | ||| | | | | |||||| || ||||| || Sbjct 3393 TTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATT-CCACATGTCGAACTGCAG 3335 Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAA 114180 || ||||| || | || || |||||| | ||| ||| | ||| || || || | Sbjct 3334 AATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAAT 3275 Query 114181 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240 ||| | || ||||| ||||| || || ||||| ||||| | ||||| | Sbjct 3274 CTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGT 3215 Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300 ||||||| | || || || | | || | || |||| || ||||| || Sbjct 3214 GCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTG 3155 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGG 114357 ||||| | ||||| ||||| || | |||||| || |||| ||| |||||| Sbjct 3154 AACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGCACGGG 3098 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 |||| |||| ||||| | | || || || ||| ||||| ||||| || || Sbjct 3097 ATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTG 3038 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477 ||||| | | | ||| | || | | | || |||| || || ||||| | || Sbjct 3037 CAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGA 2978 Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537 |||||||| ||||||| | |||||| | |||||| || || || || |||| Sbjct 2977 GGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAG 2918 Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597 || || || || ||||||| |||||| || || ||| |||| || |||||||| Sbjct 2917 GTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTT 2858 Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 114656 ||| |||||| | || | || ||||| ||||||| || ||| || || | ||| | | | Sbjct 2857 GTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTT 2798 Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716 | | | || | | ||| | | | || ||||| |||||||||| ||| || || | Sbjct 2797 CTGGGCCTTG-ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCT 2739 Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776 | ||||| ||||| | || | || || || || | ||||| | ||| | || Sbjct 2738 CGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCC 2679 Query 114777 ATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGA 114836 | | | || ||| |||||||||||||| ||||| || ||||| || ||| ||| | Sbjct 2678 AGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACA 2619 Query 114837 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 114896 | || || ||| || || | || || || || | || | || || | || Sbjct 2618 GGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGA 2559 Query 114897 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 114950 ||| || |||||||| || ||||| | || | | || | | || ||| Sbjct 2558 CATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC---AGGGCGCTTGTTGCCAC 2502 Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAG 115010 |||||| ||||| | || ||| || || ||||| ||||| || | ||| || | | Sbjct 2501 CCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTG 2442 Query 115011 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCAT 115068 | ||| || || || || |||||| | |||| | || | |||| || || Sbjct 2441 ACGTGCCGTTAGTGCCAGCAATGTACGAGCC--GGTGGCGCGGATACGGTGGACGTTCAG 2384 Query 115069 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 115128 |||||||| || ||| ||| ||||| || || | | || | ||||||| || Sbjct 2383 GCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACC 2324 Query 115129 GTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTG 115187 || || |||| |||| | ||| | |||||| ||| | || ||||| || | Sbjct 2323 CTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCTGCGGCG 2265 Query 115188 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 | ||||||||||| || || |||| ||||| |||| Sbjct 2264 TGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAA 2228 >seq298 Length=37418 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 10967 GCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 11026 ||||| ||||| ||||||||||| || |||||| |||| ||||| |||| | | Sbjct 33103 GCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCAAACAGA 33044 Query 11027 TCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCG-GAACA 11085 || || || | | | |||||||| ||||||||||||||||| | || | || ||| Sbjct 33043 TCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGACA 32984 Query 11086 TTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGT 11145 | || ||| || ||| || || || || | || || || || ||||| || || Sbjct 32983 CT-GAAGAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGGT 32925 Query 11146 CCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 11191 ||||| || | || | |||||| || || ||| |||||||| Sbjct 32924 GCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCA 32879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347036577320