Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq76 230 3e-55
seq298 86.0 7e-12
>seq76
Length=103561
Score = 230 bits (254), Expect = 3e-55
Identities = 836/1297 (64%), Gaps = 25/1297 (2%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| |||| ||||| ||||| ||||| || ||||| |||| |||||| | ||| ||
Sbjct 3513 TAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAA 3454
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| || |||||||| || | ||| || ||| || | ||| | | | | || ||||
Sbjct 3453 GCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCT 3394
Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 114120
||||| | | ||||||| | | ||| | | | | |||||| || ||||| ||
Sbjct 3393 TTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATT-CCACATGTCGAACTGCAG 3335
Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAA 114180
|| ||||| || | || || |||||| | ||| ||| | ||| || || || |
Sbjct 3334 AATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAAT 3275
Query 114181 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240
||| | || ||||| ||||| || || ||||| ||||| | ||||| |
Sbjct 3274 CTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGT 3215
Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300
||||||| | || || || | | || | || |||| || ||||| ||
Sbjct 3214 GCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTG 3155
Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGG 114357
||||| | ||||| ||||| || | |||||| || |||| ||| ||||||
Sbjct 3154 AACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGCACGGG 3098
Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417
|||| |||| ||||| | | || || || ||| ||||| ||||| || ||
Sbjct 3097 ATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTG 3038
Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477
||||| | | | ||| | || | | | || |||| || || ||||| | ||
Sbjct 3037 CAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGA 2978
Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537
|||||||| ||||||| | |||||| | |||||| || || || || ||||
Sbjct 2977 GGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAG 2918
Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597
|| || || || ||||||| |||||| || || ||| |||| || ||||||||
Sbjct 2917 GTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTT 2858
Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 114656
||| |||||| | || | || ||||| ||||||| || ||| || || | ||| | | |
Sbjct 2857 GTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTT 2798
Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716
| | | || | | ||| | | | || ||||| |||||||||| ||| || || |
Sbjct 2797 CTGGGCCTTG-ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCT 2739
Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776
| ||||| ||||| | || | || || || || | ||||| | ||| | ||
Sbjct 2738 CGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCC 2679
Query 114777 ATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGA 114836
| | | || ||| |||||||||||||| ||||| || ||||| || ||| ||| |
Sbjct 2678 AGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACA 2619
Query 114837 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 114896
| || || ||| || || | || || || || | || | || || | ||
Sbjct 2618 GGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGA 2559
Query 114897 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 114950
||| || |||||||| || ||||| | || | | || | | || |||
Sbjct 2558 CATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC---AGGGCGCTTGTTGCCAC 2502
Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAG 115010
|||||| ||||| | || ||| || || ||||| ||||| || | ||| || | |
Sbjct 2501 CCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTG 2442
Query 115011 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCAT 115068
| ||| || || || || |||||| | |||| | || | |||| || ||
Sbjct 2441 ACGTGCCGTTAGTGCCAGCAATGTACGAGCC--GGTGGCGCGGATACGGTGGACGTTCAG 2384
Query 115069 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 115128
|||||||| || ||| ||| ||||| || || | | || | ||||||| ||
Sbjct 2383 GCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACC 2324
Query 115129 GTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTG 115187
|| || |||| |||| | ||| | |||||| ||| | || ||||| || |
Sbjct 2323 CTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCTGCGGCG 2265
Query 115188 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224
| ||||||||||| || || |||| ||||| ||||
Sbjct 2264 TGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAA 2228
>seq298
Length=37418
Score = 86.0 bits (94), Expect = 7e-12
Identities = 156/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 10967 GCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 11026
||||| ||||| ||||||||||| || |||||| |||| ||||| |||| | |
Sbjct 33103 GCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCAAACAGA 33044
Query 11027 TCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCG-GAACA 11085
|| || || | | | |||||||| ||||||||||||||||| | || | || |||
Sbjct 33043 TCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGACA 32984
Query 11086 TTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGT 11145
| || ||| || ||| || || || || | || || || || ||||| || ||
Sbjct 32983 CT-GAAGAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGGT 32925
Query 11146 CCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 11191
||||| || | || | |||||| || || ||| ||||||||
Sbjct 32924 GCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCA 32879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597347036577320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |