Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq76 187 2e-42
>seq76
Length=103561
Score = 187 bits (206), Expect = 2e-42
Identities = 448/668 (67%), Gaps = 16/668 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| ||| ||||| ||||| ||||| || |||||| |||| |||
Sbjct 2060 AACTACCAGTACTTTGGCTTTAAAACCTTGGAGCGATCGTATCTGCTCAAGTTGGACGGC 2119
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | | |||||| ||||| || || | ||||| || ||| |||| || ||| ||
Sbjct 2120 AAGATCGTCGAGCGTCCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGCGAC 2179
Query 93835 GACATGCCGAATGTTTTG-CGGG-CTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892
| || ||| || | || | | | || ||||| ||| | || |
Sbjct 2180 --CGTGTCGACCGTGTGCTCGAGACGTACAACTACATGTCCAGTAAGCTTTTCACACACG 2237
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|| | || || ||||||||||| || || ||| | | ||| | || || || ||| ||
Sbjct 2238 CCTCACCTACGCTGTTCAACGCTGGCACGCCGCAGGCCCAGCTATCGTCATGCTTCTTGG 2297
Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| | |||| ||| ||| || || | ||| | || ||| ||||| |
Sbjct 2298 TCGAC-ATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGAAGACTTGTGCTATG 2356
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTT 94069
||||| || || || || || || | | |||||| |||| || |||| || |
Sbjct 2357 ATCTCCAAGATGGCCGGTGGTATTGGCCTGAACGTCCAC--CGTATCCGCGCCACCGGCT 2414
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| ||||| || || || ||||| || |||||| |||| || ||||| || |||||||
Sbjct 2415 CGTACATTGCTGGCACTAACGGCACGTCAAACGGCATCGTGCCCATGCTGCGCGTCTTCA 2474
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
||||| | || ||||| || ||||||||||| | | | || | || || |||
Sbjct 2475 ACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCCCTGGAGCCTTTGCTATCT 2534
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| || ||||| ||||| || || || | ||| ||||||| || |||||||||||||
Sbjct 2535 ACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGAACCACGGCA 2594
Query 94250 ACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306
| || ||||| | ||| | ||||| ||| || || ||| | || ||||| || |
Sbjct 2595 AGGA---GGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACCTGTTCA 2651
Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366
|||| || |||||||| ||| || ||||| || | || ||||| || || ||||| |
Sbjct 2652 TGAAGCGTGTCGAGAAGAACGCCAACTGGACACTCATGTGCCCCAACGAGTGCCCCGGTC 2711
Query 94367 TGTCCGAC 94374
|| |||||
Sbjct 2712 TGGCCGAC 2719
Score = 132 bits (146), Expect = 5e-26
Identities = 266/387 (69%), Gaps = 12/387 (3%)
Strand=Plus/Plus
Query 94993 CAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA 95052
|| |||||| | ||||||||| | ||| ||| | ||| | |||| |||||||
Sbjct 3326 CAAGGCATTCTGCAGTTCGACATGTGGAATGTCACCCCCAGCGACCTGTGGGACTGGGCC 3385
Query 95053 --GCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCA 95110
|||| | | | ||| | || ||||||||| |||| ||||||| | |||||||
Sbjct 3386 TCGCTCAAAGAACAGATCA-AGCAG-CACGGTGTGCGAAACTCGCTGCTCCTAGCCCCCA 3443
Query 95111 TGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCT 95170
|||| || || || || | || ||||| ||||||||||| | ||||| |||| ||| |
Sbjct 3444 TGCCAACTGCTTCGACCTCTCAAATCCTGGGCAACAACGAATGCTTCGAGCCCTACACTT 3503
Query 95171 CCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCC 95230
||||| | ||| | | || ||| | || || || |||| ||| ||||| || |
Sbjct 3504 CCAACATCTACCAACGTCGTGTGTTGGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTGC 3563
Query 95231 TACGGGACCT-GACGTCTCTGGGTGTGTGG---GGTGACAAGGTCAAGAACCAACTGCTA 95286
| |||||||| | || | || ||| | ||| | || || | ||||||| | |
Sbjct 3564 TGCGGGACCTAGTCGAC-CTCGGTCTTTGGTCCGATGCCA---TGAAGAACCGTATCATC 3619
Query 95287 CGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTAC 95346
||| |||||| || | |||||||| || || || | ||||||||||| | |||
Sbjct 3620 AGCGACAACGGTTCGATTCAGAACATTCCCAGTATCCCTGCCGACATCAAGGCCTTGTAC 3679
Query 95347 AAGACCGTGTGGGAGATCCCGCAGCGC 95373
||||| || ||||| ||| | ||||||
Sbjct 3680 AAGACTGTCTGGGAAATCTCCCAGCGC 3706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717764228840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |