Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq76 237 2e-57
seq249 111 2e-19
seq404 82.4 8e-11
>seq76
Length=103561
Score = 237 bits (262), Expect = 2e-57
Identities = 940/1453 (65%), Gaps = 47/1453 (3%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || |||||||| |||||||| || | || | ||| |||| | |
Sbjct 3554 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGG 3495
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| ||||||| ||||| || ||||||| || | || || |||||| || |
Sbjct 3494 GCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTA 3435
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| || || || |||| |||||| ||| || | | || || | || ||| |||
Sbjct 3434 GGAGCAGCGAGTTTCGCACACCGTGCTGCTTGA-TCTGTTCTTTGAGCGAGGCCCAGTCC 3376
Query 153207 CACAG--CGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264
||||| ||| | |||| | |||||||||||| |||| | | ||| | | |
Sbjct 3375 CACAGGTCGCTGGGGGTGACA--TTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAG 3318
Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324
|| ||| || | || |||| |||| ||| || || | ||||| || |
Sbjct 3317 GAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTA 3258
Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384
| ||| | | ||| ||||| ||| || || ||||| || | || || | ||
Sbjct 3257 GGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGACT 3198
Query 153385 CGTACGGCATGCGCAGCAGC-ACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443
|| | |||||||| || ||| | ||||| ||||| |||||||| | ||| || || ||
Sbjct 3197 CGAAGGGCATGCGTAG-AGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATA 3139
Query 153444 GGTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498
|| || || | |||||| |||||| || || ||||| | |||| |
Sbjct 3138 GGGCGGTGGCGCATATTGCTGTTATGAGCCTCGGGCACG-----GGATAATAATTGACGT 3084
Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAAT 153558
|||| || ||| ||||||||||| || || || || ||| | | || |||| ||| |
Sbjct 3083 CGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGT 3024
Query 153559 CATAG--GTCATT-TCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTA 153614
|||| | | || | || || | ||| || | | ||| | || ||||||||
Sbjct 3023 CATACTCGCCCTTGTTGTAATCGACAAACGA--CGGT--AGGGCCAGCGAGGCCAGATTG 2968
Query 153615 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCAT 153674
|| || || ||| || | | ||| ||||| | |||||||| ||| |||||| ||
Sbjct 2967 CACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTG 2908
Query 153675 TTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATG 153734
|| ||||| || | ||| ||||| || | ||||| || || ||| | ||||||
Sbjct 2907 CGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATG 2848
Query 153735 TACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---ACCTATGCAGGTCCTGCGCT 153791
|||| ||||||||| ||| | |||| ||| ||| || || | ||| ||
Sbjct 2847 AACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACC-AT--AGCTTCTGGGCC 2791
Query 153792 CGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCG 153851
| | || |||||||||||||||||| |||||||| ||| ||||||
Sbjct 2790 TTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCG 2731
Query 153852 TCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG 153911
|| |||||||||||||| || ||||| |||| | || ||||| || | ||| | ||
Sbjct 2730 TCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCG 2671
Query 153912 TCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGC 153971
| | ||| || ||||||||| || || | ||| || || | ||||||||
Sbjct 2670 TTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGG 2611
Query 153972 GCCTTGCAATCCTCCGCGCC---CATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTC 154027
|| |||||| ||| | |||||| || | || | || | | ||| ||
Sbjct 2610 GCACGAATCTCCTCCTTGCCGTGGTTCTTGCGT---AGGTCGAGGAACTCGA-AGACATC 2555
Query 154028 GGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATC 154084
||| ||||| || || | ||||| || | ||| || ||| || || ||||| ||
Sbjct 2554 GGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTC 2495
Query 154085 GACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCC 154144
|| | ||| | | |||||||||||||||| |||||| | | |||| ||| |||||
Sbjct 2494 AACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCC 2435
Query 154145 GTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC 154204
||| || | || | |||| |||||| | | || ||||| | |||||| ||
Sbjct 2434 GTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACC 2375
Query 154205 GCCGCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGC 154263
||| | ||| || || ||| | |||| |||||| |||||| || || ||||
Sbjct 2374 ACCGGCCATCTTGGAGATCATAGCACAAGTC-TTCAGCGTATCGTAGATACCCTCAATGC 2316
Query 154264 TATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGC-GCGTTCCCGCC 154322
| || || | | ||| |||||| || || | | || || ||| |||| || ||
Sbjct 2315 TGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCTGCGGCGTGCCAGCG 2257
Query 154323 GAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCG 154382
|| || || || ||||| || || || || | ||| | |||||| |||
Sbjct 2256 TTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAGTTGTACGTCTCG 2197
Query 154383 ATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGC 154442
| | |||| | ||||| || |||| || || ||||||| ||||||||||
Sbjct 2196 AGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTGC 2137
Query 154443 GGACGTTCGGCGA 154455
||||| ||| |||
Sbjct 2136 GGACGCTCGACGA 2124
>seq249
Length=46353
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | ||| | ||| | | ||||||||||||||||||||||||
Sbjct 8341 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAG 8282
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||||| || || || |||| | | || |||||||| || || |||||
Sbjct 8281 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGG 8222
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| ||| || ||| | |||| || | || |||| || || ||
Sbjct 8221 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTG-TCAATAGTATCGGAGGATTCGAC 8163
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||| ||||| || |||||||| |||||
Sbjct 8162 TTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| ||||| ||| | ||||| | | ||||||||||| |||||||||||
Sbjct 8570 GCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 8511
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| |||||| ||||| | || || |||| | | || |||||||| || || || ||
Sbjct 8510 GAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGG 8451
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || || || ||| || ||| | |||| || | || || | ||||| |
Sbjct 8450 AATACCCTCCTTATCTTGGATCTTCGATTTGACATTG-TCAATAGTATCAGAAGACTCAA 8392
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||||| ||||| ||||| || || || || |||||
Sbjct 8391 CCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343
Score = 82.4 bits (90), Expect = 8e-11
Identities = 111/151 (74%), Gaps = 4/151 (3%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || |||||| ||||| || ||||
Sbjct 7787 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCG 7728
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| ||||||||||| ||||| || || ||||| || || || ||| | || | ||
Sbjct 7727 AAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATC-CTGAATCTTCGACTTGAC 7669
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTC 138569
|||| || | |||||||| ||||| |||||
Sbjct 7668 ATTG-TCGATGGTGTCGGAAGACTCGACCTC 7639
>seq404
Length=24851
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/213 (70%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 138404 AAACTAAATG-TATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|||| | ||| |||| |||| ||| || |||||||||||| || || || |||
Sbjct 18483 AAACAAGATGATATGACTGAC--CTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 18426
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| || || || || | |||| || |||||||| ||||| || || || || || ||
Sbjct 18425 TCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCC 18366
Query 138523 GTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| || || | ||||| | | |||||| | ||||| ||||| | || | |||
Sbjct 18365 TGGATCTTAGACTTGACATTGT-CGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGT 18307
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || || || || || |||||||||||
Sbjct 18306 CTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 18274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256947316880
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