Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq76 237 2e-57 seq249 111 2e-19 seq404 82.4 8e-11 >seq76 Length=103561 Score = 237 bits (262), Expect = 2e-57 Identities = 940/1453 (65%), Gaps = 47/1453 (3%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| |||||||| || | || | ||| |||| | | Sbjct 3554 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGG 3495 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| ||||||| ||||| || ||||||| || | || || |||||| || | Sbjct 3494 GCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTA 3435 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | || || || |||| |||||| ||| || | | || || | || ||| ||| Sbjct 3434 GGAGCAGCGAGTTTCGCACACCGTGCTGCTTGA-TCTGTTCTTTGAGCGAGGCCCAGTCC 3376 Query 153207 CACAG--CGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||| ||| | |||| | |||||||||||| |||| | | ||| | | | Sbjct 3375 CACAGGTCGCTGGGGGTGACA--TTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAG 3318 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324 || ||| || | || |||| |||| ||| || || | ||||| || | Sbjct 3317 GAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTA 3258 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384 | ||| | | ||| ||||| ||| || || ||||| || | || || | || Sbjct 3257 GGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGACT 3198 Query 153385 CGTACGGCATGCGCAGCAGC-ACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 || | |||||||| || ||| | ||||| ||||| |||||||| | ||| || || || Sbjct 3197 CGAAGGGCATGCGTAG-AGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATA 3139 Query 153444 GGTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498 || || || | |||||| |||||| || || ||||| | |||| | Sbjct 3138 GGGCGGTGGCGCATATTGCTGTTATGAGCCTCGGGCACG-----GGATAATAATTGACGT 3084 Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAAT 153558 |||| || ||| ||||||||||| || || || || ||| | | || |||| ||| | Sbjct 3083 CGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGT 3024 Query 153559 CATAG--GTCATT-TCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTA 153614 |||| | | || | || || | ||| || | | ||| | || |||||||| Sbjct 3023 CATACTCGCCCTTGTTGTAATCGACAAACGA--CGGT--AGGGCCAGCGAGGCCAGATTG 2968 Query 153615 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCAT 153674 || || || ||| || | | ||| ||||| | |||||||| ||| |||||| || Sbjct 2967 CACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTG 2908 Query 153675 TTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATG 153734 || ||||| || | ||| ||||| || | ||||| || || ||| | |||||| Sbjct 2907 CGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATG 2848 Query 153735 TACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---ACCTATGCAGGTCCTGCGCT 153791 |||| ||||||||| ||| | |||| ||| ||| || || | ||| || Sbjct 2847 AACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACC-AT--AGCTTCTGGGCC 2791 Query 153792 CGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCG 153851 | | || |||||||||||||||||| |||||||| ||| |||||| Sbjct 2790 TTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAACTCG 2731 Query 153852 TCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG 153911 || |||||||||||||| || ||||| |||| | || ||||| || | ||| | || Sbjct 2730 TCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCG 2671 Query 153912 TCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGC 153971 | | ||| || ||||||||| || || | ||| || || | |||||||| Sbjct 2670 TTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGG 2611 Query 153972 GCCTTGCAATCCTCCGCGCC---CATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTC 154027 || |||||| ||| | |||||| || | || | || | | ||| || Sbjct 2610 GCACGAATCTCCTCCTTGCCGTGGTTCTTGCGT---AGGTCGAGGAACTCGA-AGACATC 2555 Query 154028 GGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATC 154084 ||| ||||| || || | ||||| || | ||| || ||| || || ||||| || Sbjct 2554 GGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTC 2495 Query 154085 GACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCC 154144 || | ||| | | |||||||||||||||| |||||| | | |||| ||| ||||| Sbjct 2494 AACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCC 2435 Query 154145 GTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC 154204 ||| || | || | |||| |||||| | | || ||||| | |||||| || Sbjct 2434 GTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACC 2375 Query 154205 GCCGCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGC 154263 ||| | ||| || || ||| | |||| |||||| |||||| || || |||| Sbjct 2374 ACCGGCCATCTTGGAGATCATAGCACAAGTC-TTCAGCGTATCGTAGATACCCTCAATGC 2316 Query 154264 TATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGC-GCGTTCCCGCC 154322 | || || | | ||| |||||| || || | | || || ||| |||| || || Sbjct 2315 TGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCTGCGGCGTGCCAGCG 2257 Query 154323 GAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCG 154382 || || || || ||||| || || || || | ||| | |||||| ||| Sbjct 2256 TTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAGTTGTACGTCTCG 2197 Query 154383 ATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGC 154442 | | |||| | ||||| || |||| || || ||||||| |||||||||| Sbjct 2196 AGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTGC 2137 Query 154443 GGACGTTCGGCGA 154455 ||||| ||| ||| Sbjct 2136 GGACGCTCGACGA 2124 >seq249 Length=46353 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| | ||| | | |||||||||||||||||||||||| Sbjct 8341 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAG 8282 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || |||| | | || |||||||| || || ||||| Sbjct 8281 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGG 8222 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || ||| | |||| || | || |||| || || || Sbjct 8221 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTG-TCAATAGTATCGGAGGATTCGAC 8163 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| ||||| || |||||||| ||||| Sbjct 8162 TTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| ||| | ||||| | | ||||||||||| ||||||||||| Sbjct 8570 GCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 8511 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||| | || || |||| | | || |||||||| || || || || Sbjct 8510 GAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGG 8451 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| || ||| | |||| || | || || | ||||| | Sbjct 8450 AATACCCTCCTTATCTTGGATCTTCGATTTGACATTG-TCAATAGTATCAGAAGACTCAA 8392 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||| ||||| ||||| || || || || ||||| Sbjct 8391 CCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || |||||| ||||| || |||| Sbjct 7787 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCG 7728 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 | ||||||||||| ||||| || || ||||| || || || ||| | || | || Sbjct 7727 AAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATC-CTGAATCTTCGACTTGAC 7669 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTC 138569 |||| || | |||||||| ||||| ||||| Sbjct 7668 ATTG-TCGATGGTGTCGGAAGACTCGACCTC 7639 >seq404 Length=24851 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/213 (70%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 138404 AAACTAAATG-TATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 |||| | ||| |||| |||| ||| || |||||||||||| || || || ||| Sbjct 18483 AAACAAGATGATATGACTGAC--CTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 18426 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || || || || || | |||| || |||||||| ||||| || || || || || || Sbjct 18425 TCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCC 18366 Query 138523 GTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| || || | ||||| | | |||||| | ||||| ||||| | || | ||| Sbjct 18365 TGGATCTTAGACTTGACATTGT-CGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGT 18307 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || || || || || ||||||||||| Sbjct 18306 CTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 18274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256947316880