Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq249 100 2e-16 >seq249 Length=46353 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | ||| | ||| || || || || ||||| |||||||| ||| | Sbjct 8341 CCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAG 8282 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | || ||||| || | |||| |||||| || || || Sbjct 8281 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGG 8222 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || || ||| ||| | || ||||||||| ||| || Sbjct 8221 ATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACT 8162 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| ||| |||||||| || || ||||| || ||||||||||||||| Sbjct 8161 TCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCATA 8114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357388171326515