Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq76 170 3e-37 >seq76 Length=103561 Score = 170 bits (188), Expect = 3e-37 Identities = 456/682 (67%), Gaps = 14/682 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| |||| |||| |||||| | | |||||||||||||| Sbjct 3901 CTGGTCAACAGTGAACTGGATGGGAGCGGCGGC-GGCCTGGGTACGCAGATAGTACATGC 3843 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || || || ||| || | ||||||| | | ||||| || | | | Sbjct 3842 CAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAG 3783 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | || |||||| |||||||| ||||| || |||||||||| |||| ||||| ||| Sbjct 3782 GATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAG-CGCCACGATCGGCG 3724 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | || ||| ||| || || ||||| || |||||| ||| | | || || Sbjct 3723 GCCATTTGCACAACGGTGCGCTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATG 3664 Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | ||| | | || | || |||| |||| ||||||||| || | | || | Sbjct 3663 TCGGCAGGGATA-CTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTCTT 3605 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | | || ||| | || | || || ||||||| ||| |||||||| || Sbjct 3604 CATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGACGAC 3545 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || || | || ||| | || | | | |||| ||| | || ||||| Sbjct 3544 CTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 3485 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||||||||| | || |||| ||| || || |||||||| || |||||||| || Sbjct 3484 TTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGA 3425 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCGCAC 204374 ||| |||||||||| | | || ||| | || || |||| |||||| || | | Sbjct 3424 GTTTCGCACACCGTGCTGCTTGA-TCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGC 3366 Query 204375 TGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGT 204434 |||| | || ||||||||||||||| | |||||||| || || ||||| | Sbjct 3365 TGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCAT 3306 Query 204435 ACGTCGGATAAGGCTGATCCTC-TTCT--GCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 | |||| || | || | || ||| || | || ||||||||| | | |||| | Sbjct 3305 AGGTCGAGTA--GGTG-CCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGT 3249 Query 204492 AGTACATGGTCTCAAAGATCTG 204513 ||| |||||||| || ||||| Sbjct 3248 GGTAGATGGTCTCGAAAATCTG 3227 Score = 100 bits (110), Expect = 5e-16 Identities = 440/684 (64%), Gaps = 12/684 (2%) Strand=Plus/Minus Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119 |||||| ||| |||||| ||| | || || |||||| ||| ||| || || || Sbjct 2761 CTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCA 2702 Query 205120 TTTTTTGGGACACATCAGAGACCACATCT-GATCGTCTTTCACCCTCTCCATAAACAGGT 205178 | ||||| ||||| || | ||| | | || ||| || | || ||| ||||||| Sbjct 2701 CTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCG-ACACGCTTCATGAACAGGT 2643 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 || ||||||||| | ||||| || ||||| | ||| | || | || |||||| Sbjct 2642 CGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCT 2583 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | | ||| || || || | | ||||| ||||||||||||| | | || | Sbjct 2582 TGCGTAGGTCGAGG-AACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAG 2524 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || || || | |||||| ||||||||||| || ||| | | |||||| || ||| Sbjct 2523 GCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGC 2464 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCC--TTCAG 205415 ||||| ||||| | ||||| | || ||||| |||| ||| |||||| | | Sbjct 2463 AGCATGGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCG 2404 Query 205416 CCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC-AC 205474 | ||| || || | | |||||| || || | ||||| |||| || | | Sbjct 2403 CGGATACGGTG--GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAG 2346 Query 205475 TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCA 205533 |||| ||| || |||||| || | ||| || ||| || |||| |||| |||| Sbjct 2345 TCTT-CAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCA-TGTCGACCAAGAAGCA 2288 Query 205534 CGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAA 205593 || | |||| ||| ||||| |||| ||| ||||| || |||||| |||| Sbjct 2287 TGACGATAGCTGGGCCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAA 2228 Query 205594 GCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAAT 205653 |||| | || | |||| ||||| ||||| | || | | | ||| || Sbjct 2227 AAGCTTACTGGACATGTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGAT 2168 Query 205654 ACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTT 205713 ||| | ||| | | ||||| | ||| || || | ||| | | | | ||| || ||| Sbjct 2167 ACCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTT 2108 Query 205714 GAGCAGATAGGCTCTCTCTAGGGT 205737 ||||||||| | || ||| | ||| Sbjct 2107 GAGCAGATACGATCGCTCCAAGGT 2084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795146463232240