Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq249 125 7e-24 seq404 105 7e-18 seq133 100 3e-16 >seq249 Length=46353 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||||||||||||| | || ||||| || || Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | ||| || |||| ||||| ||||| || || | || || Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || ||||| |||||||| || | || |||||| |||||||||| Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || |||||||| | || || ||| |||| || ||| || | || || Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8341 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||||||||||||| | || || ||| | | Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | ||| || |||| || || ||||| |||||| | || || Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATCAG 8462 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || ||||| ||| |||| || | || || ||| ||||||||| Sbjct 8463 CAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAAC 8522 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||||||| | || || ||| |||| |||||| || | || |||| Sbjct 8523 ATCCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGCC 8571 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| ||||| || || || || ||||||||| | || ||||| || |||| | | Sbjct 7897 TCGTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTG 7956 Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | ||| || |||| ||||| ||||| || || | || || ||||| || | Sbjct 7957 ACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGA 8016 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 ||| || ||||| |||||||| || | || |||||| ||||||||||||||||||| Sbjct 8017 TTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGG 8076 Query 38434 AAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | | || || ||| |||| || ||| || | || || Sbjct 8077 AGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8113 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| |||||||| | || |||||| | |||||| | | | | | || Sbjct 7618 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 7677 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || || | || || ||||| |||||| | ||||| ||||| || |||| ||| || || Sbjct 7678 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 7737 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || || || |||| |||||||| ||||||||||||||| ||||| | || || || Sbjct 7738 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 7797 Query 38448 TTGGTGCTGCG 38458 |||| || || Sbjct 7798 CTGGTCCTCCG 7808 >seq404 Length=24851 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || |||||| | || || ||| || Sbjct 18271 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 18330 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || || |||| || || ||||| |||||| | || Sbjct 18331 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 18390 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| || || | ||| ||||| ||||| || || | |||||||| ||||||| Sbjct 18391 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTAC 18450 Query 38421 AACATCCAAAAGG 38433 |||||||| |||| Sbjct 18451 AACATCCAGAAGG 18463 >seq133 Length=77988 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| | || |||||| || | |||| | Sbjct 32364 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 32305 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| ||||| |||||| | ||||||||||| || Sbjct 32304 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 32246 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| ||||| || || | ||||| | ||||||||||||||||| Sbjct 32245 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAA 32186 Query 38432 GG 38433 || Sbjct 32185 GG 32184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167304351360