Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq170 104 2e-16 >seq170 Length=65362 Score = 104 bits (114), Expect = 2e-16 Identities = 186/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 518033 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 518092 |||||||| |||| | ||| | || | || | | || | ||| | ||||| ||| Sbjct 46366 TCTTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCATCCTCA 46307 Query 518093 AGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 518152 | | ||| || | ||||| || |||||||||| ||| || || || || || Sbjct 46306 ATGGTCAACAGCGAGACATCGAAAGTGCCACCACCCAGATCGAAGATCAGGACGTTGCGC 46247 Query 518153 TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 518212 || || || ||||||||||| || |||| ||||| ||||| || || ||||| Sbjct 46246 TCACCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTAATG 46187 Query 518213 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 518272 || | ||| ||||| ||||| ||||| || | || || || || || | || ||| Sbjct 46186 ATACGCAAGACATTCAGACCGGCAATAAGACCAGAGTCCTTGGTAGCCTGACGCTGAGAA 46127 Query 518273 TCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||||| || || ||||||||||| ||||| || Sbjct 46126 TCGTTGAAGTAGGCAGGAACAGTGATAACAGC 46095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780778781124574