Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq170 196 6e-45 seq325 149 8e-31 >seq170 Length=65362 Score = 196 bits (216), Expect = 6e-45 Identities = 279/390 (72%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 ||||||||||||| || || || || || || | ||||| || |||||||| | ||| Sbjct 46366 TCTTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCATCCTCA 46307 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | |||| ||| ||||| || || ||||||||||| || || || || ||||| Sbjct 46306 ATGGTCAACAGCGAGACATCGAAAGTGCCACCACCCAGATCGAAGATCAGGACGTTGCGC 46247 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || |||||||| |||||||| || || || || || || || || ||||| Sbjct 46246 TCACCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTAATG 46187 Query 7643 ATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 ||||| |||||| ||||| || |||||| | | || || || || || || || || Sbjct 46186 ATACGCAAGACA-TTCAGACCGGCAATAAGACCAGAGTCCTTGGTAGCCTGACGCTGAGA 46128 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 |||||| |||||||| || || || | || |||| | || | |||| || ||||| Sbjct 46127 ATCGTTGAAGTAGGCAGGAACAGTGATAACAGCGTTGTTAACGGTGGTACCAAGGTACGA 46068 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || ||| | || ||| ||| | |||||||| || || ||||| || | | |||||| Sbjct 46067 CTCAGCGGTCTCACGCATCTTGATCAGAACCATAGAGGAGATCTCCTCGGGGGTAAACTG 46008 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAAT 7851 || || || || || || ||||| ||||| Sbjct 46007 CTTGGTCTCGCCCTTGAACTCAACCTCAAT 45978 >seq325 Length=33354 Score = 149 bits (164), Expect = 8e-31 Identities = 482/744 (65%), Gaps = 31/744 (4%) Strand=Plus/Minus Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085 |||| ||||| | || ||||| || || ||||||||||| || || | || | ||| | Sbjct 18065 CGGCCTGGACAGCGGCACCGTAAGCAACGGCCTCATCGGGATTGATGGACTTCTCCAGCT 18006 Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145 |||||||| || |||| || | | | || || || ||||| || || || |||| Sbjct 18005 TCTTACCGTTGAAGAAATCGGACAGAAGCTTCTGGATCTTGGGGATACGAGTAGAACCAC 17946 Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGA--------TCTTTGAGTCTCGAAG 7197 | |||| ||||| |||| || | | || |||| || || || || | Sbjct 17945 CAACCAGGACGATCTCATCAACCTGCTTCTTCTCGAGGCCAGCATCCTTCAGGACGGAGG 17886 Query 7198 TGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA---CAGTTCCTCAAA 7254 | || || |||| | | | | ||| || | | ||| ||||| || Sbjct 17885 --------CAACGGGCTCCAGAG---TGCCGGCGAAGGCCTTGGAGTTCAGCTCCTCGAA 17837 Query 7255 ACGTGCACGGGTAATGGATGTATAG--AAATCAACGCCGTCGTATAACGAATCAATTTCA 7312 ||| |||||||| || || | || || || | || ||| | | | ||| || || Sbjct 17836 ACGAGCACGGGTGATC--TGGACAGTGAAGTCTTCACCATCGAACAGAGTATCGATCTCG 17779 Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372 ||||| || || || ||||| | || ||||| || ||||| || || || || | | Sbjct 17778 ATGGTAGTCTGGGCACCAGAAGACAGGGTACGCTTGGCACGCTCGCAGGCAGTGCGGAGA 17719 Query 7373 CGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCA 7432 ||||| |||||||| | | |||||| | ||| ||||| || || | || || | Sbjct 17718 CGACGCAGGGCACGGGCATCACCGGACAGATCCTTCTTGGTCTTGCGGGTGAAGTCCTTC 17659 Query 7433 GAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGC 7491 | ||| ||| | | || | | ||| || || | |||||||| ||| ||||| || || Sbjct 17658 TTGCAGTAGTCCA-GAAGGTTGGTATCAAAGTCCTGACCACCCAGGTGAGTATCACCAGC 17600 Query 7492 GGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACC 7551 ||| || || || |||| || || | ||| | |||| || ||||| || ||||| Sbjct 17599 GGTAGCCTTAACGGTGAAGACGCCACCCTGAATAGTCAACAGAGAGACATCGAAAGTACC 17540 Query 7552 ACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTCTTATCGAGACC 7608 ||||||||| || | || || || || || | ||| ||| | ||||| Sbjct 17539 ACCACCCAGATCGTAGATCAGGACATTGCGCTCCTTGTCAGACTTGCCGGAGCCCAGACC 17480 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| || || || || || || || || || || ||||| ||| ||||||||||| ||| Sbjct 17479 GTAAGCAATGGCAGCGGCGGTAGGCTCGTTGATGATACGCAGAACGTTCAGGCCAGAAAT 17420 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | ||||| || || || || || || ||||| |||||||| || || || | Sbjct 17419 GGCACCGGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCAGGAACAGTGAT 17360 Query 7729 GACCGCGTCCGTGACTTTCTTACC 7752 ||| || | | || ||||| || Sbjct 17359 GACGGCCTTCTCAACCTTCTTGCC 17336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125821478360