Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq170 196 6e-45
seq325 149 8e-31
>seq170
Length=65362
Score = 196 bits (216), Expect = 6e-45
Identities = 279/390 (72%), Gaps = 2/390 (1%)
Strand=Plus/Minus
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
||||||||||||| || || || || || || | ||||| || |||||||| | |||
Sbjct 46366 TCTTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCATCCTCA 46307
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | |||| ||| ||||| || || ||||||||||| || || || || |||||
Sbjct 46306 ATGGTCAACAGCGAGACATCGAAAGTGCCACCACCCAGATCGAAGATCAGGACGTTGCGC 46247
Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642
|| | || |||||||| |||||||| || || || || || || || || |||||
Sbjct 46246 TCACCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTAATG 46187
Query 7643 ATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701
||||| |||||| ||||| || |||||| | | || || || || || || || ||
Sbjct 46186 ATACGCAAGACA-TTCAGACCGGCAATAAGACCAGAGTCCTTGGTAGCCTGACGCTGAGA 46128
Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761
|||||| |||||||| || || || | || |||| | || | |||| || |||||
Sbjct 46127 ATCGTTGAAGTAGGCAGGAACAGTGATAACAGCGTTGTTAACGGTGGTACCAAGGTACGA 46068
Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821
|| ||| | || ||| ||| | |||||||| || || ||||| || | | ||||||
Sbjct 46067 CTCAGCGGTCTCACGCATCTTGATCAGAACCATAGAGGAGATCTCCTCGGGGGTAAACTG 46008
Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAAT 7851
|| || || || || || ||||| |||||
Sbjct 46007 CTTGGTCTCGCCCTTGAACTCAACCTCAAT 45978
>seq325
Length=33354
Score = 149 bits (164), Expect = 8e-31
Identities = 482/744 (65%), Gaps = 31/744 (4%)
Strand=Plus/Minus
Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085
|||| ||||| | || ||||| || || ||||||||||| || || | || | ||| |
Sbjct 18065 CGGCCTGGACAGCGGCACCGTAAGCAACGGCCTCATCGGGATTGATGGACTTCTCCAGCT 18006
Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145
|||||||| || |||| || | | | || || || ||||| || || || ||||
Sbjct 18005 TCTTACCGTTGAAGAAATCGGACAGAAGCTTCTGGATCTTGGGGATACGAGTAGAACCAC 17946
Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGA--------TCTTTGAGTCTCGAAG 7197
| |||| ||||| |||| || | | || |||| || || || || |
Sbjct 17945 CAACCAGGACGATCTCATCAACCTGCTTCTTCTCGAGGCCAGCATCCTTCAGGACGGAGG 17886
Query 7198 TGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA---CAGTTCCTCAAA 7254
| || || |||| | | | | ||| || | | ||| ||||| ||
Sbjct 17885 --------CAACGGGCTCCAGAG---TGCCGGCGAAGGCCTTGGAGTTCAGCTCCTCGAA 17837
Query 7255 ACGTGCACGGGTAATGGATGTATAG--AAATCAACGCCGTCGTATAACGAATCAATTTCA 7312
||| |||||||| || || | || || || | || ||| | | | ||| || ||
Sbjct 17836 ACGAGCACGGGTGATC--TGGACAGTGAAGTCTTCACCATCGAACAGAGTATCGATCTCG 17779
Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372
||||| || || || ||||| | || ||||| || ||||| || || || || | |
Sbjct 17778 ATGGTAGTCTGGGCACCAGAAGACAGGGTACGCTTGGCACGCTCGCAGGCAGTGCGGAGA 17719
Query 7373 CGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCA 7432
||||| |||||||| | | |||||| | ||| ||||| || || | || || |
Sbjct 17718 CGACGCAGGGCACGGGCATCACCGGACAGATCCTTCTTGGTCTTGCGGGTGAAGTCCTTC 17659
Query 7433 GAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGC 7491
| ||| ||| | | || | | ||| || || | |||||||| ||| ||||| || ||
Sbjct 17658 TTGCAGTAGTCCA-GAAGGTTGGTATCAAAGTCCTGACCACCCAGGTGAGTATCACCAGC 17600
Query 7492 GGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACC 7551
||| || || || |||| || || | ||| | |||| || ||||| || |||||
Sbjct 17599 GGTAGCCTTAACGGTGAAGACGCCACCCTGAATAGTCAACAGAGAGACATCGAAAGTACC 17540
Query 7552 ACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTCTTATCGAGACC 7608
||||||||| || | || || || || || | ||| ||| | |||||
Sbjct 17539 ACCACCCAGATCGTAGATCAGGACATTGCGCTCCTTGTCAGACTTGCCGGAGCCCAGACC 17480
Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668
||| || || || || || || || || || || ||||| ||| ||||||||||| |||
Sbjct 17479 GTAAGCAATGGCAGCGGCGGTAGGCTCGTTGATGATACGCAGAACGTTCAGGCCAGAAAT 17420
Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728
| | ||||| || || || || || || ||||| |||||||| || || || |
Sbjct 17419 GGCACCGGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCAGGAACAGTGAT 17360
Query 7729 GACCGCGTCCGTGACTTTCTTACC 7752
||| || | | || ||||| ||
Sbjct 17359 GACGGCCTTCTCAACCTTCTTGCC 17336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635125821478360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |