Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq76 208 9e-49 seq53 123 3e-23 seq298 120 4e-22 >seq76 Length=103561 Score = 208 bits (230), Expect = 9e-49 Identities = 1068/1689 (63%), Gaps = 47/1689 (3%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| ||||| || || ||||||||| |||||| | | ||||| | | Sbjct 3858 CGCAGATAGTACATGCCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTG 3799 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527 | |||| | || ||| | ||| | ||||| |||||| |||||||||||||| Sbjct 3798 ATTTTGCCCATGGTAGGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAA 3739 Query 109528 CGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTCCCAGACAGTC 109584 |||||||| || ||||| | | | | | | || || ||||||||||||||| Sbjct 3738 GCGCCACGATCGGCGGCCATTTGCACAACGGTGCGCT---GGGAGATTTCCCAGACAGTC 3682 Query 109585 TTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCC 109644 |||||||| |||||| || | || || ||||| ||||| || || | Sbjct 3681 TTGTACAAGGCCTTGATGTCGGCAGGGATACTGGGAATGTTCTGAATCGAACCGTTGTCG 3622 Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACA 109704 | | || | | |||||| | | ||||| ||||||| | || || | Sbjct 3621 CTGATGATACGGTTCTTCATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCCCGCAGC 3562 Query 109705 AGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC 109764 || |||||| || || || ||||| | || || |||||||||| | Sbjct 3561 AGCCAGGGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAA 3502 Query 109765 GTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATG 109824 |||||||| ||||| || || |||||||| |||||||| | || ||||| || |||||| Sbjct 3501 GTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATG 3442 Query 109825 GGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCC 109884 || || | ||| || |||||| | ||| | | ||| | | | || | | | || Sbjct 3441 GGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCC 3382 Query 109885 CAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCC 109944 || || | | | || | | || || |||||| || || || | || Sbjct 3381 CAGTCCCACAGGTCGCTGG-----GGGTGAC-ATTCCACATGTCGAACTGCAGAATGCCT 3328 Query 109945 TCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGAT 110004 | | | ||||||| |||| | || ||| | || || || || | |||| | Sbjct 3327 TGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCAC 3268 Query 110005 GAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGAC 110064 || || ||| || || || || || ||||| ||||| || ||||| ||| | | Sbjct 3267 GAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCC 3208 Query 110065 TCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCG 110124 || || | |||||||| | | | | || |||| ||||||||||||||||| Sbjct 3207 TCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCA 3148 Query 110125 AGACCAATGGGGCGATGCTTCAT------GTTA-GAGCGTCGAGCAGTTTCTACGGGGTA 110177 | ||||| ||||| || ||| |||| |||| ||| ||| |||| || Sbjct 3147 ACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGCCTCGGGCA-------CGGGATA 3095 Query 110178 AAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG 110237 | | ||| |||||||| || || || || | || ||| ||||| || || || Sbjct 3094 ATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAG 3035 Query 110238 TTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGC 110297 || | | | || || | | | | || |||| | || || || | || || Sbjct 3034 CTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGAGGC 2975 Query 110298 AAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTT 110357 ||||||||||||| ||| || | || ||| || | || || || |||| ||| Sbjct 2974 CAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTT 2915 Query 110358 GGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATA 110417 ||| || || |||| ||||||||| || || |||||| |||||||| || Sbjct 2914 GGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTA 2855 Query 110418 GAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGG 110476 |||||| | ||| | || || || || || | || ||| ||||| | ||||| | || | Sbjct 2854 CAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTTCTG 2795 Query 110477 CGGCGGGGACAGTT--GCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTC 110534 ||| || || ||| ||| | ||| ||| |||||||| ||||| |||| Sbjct 2794 -GGCCTTGATGGTGAGGCGGCCGCG-GCCCTCGCTC-TCGTACTTTTCGTACAGAGCCTC 2738 Query 110535 AAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCA 110594 || || | ||||| || | ||||| || || ||| || | ||| | ||| Sbjct 2737 GAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCA 2678 Query 110595 ATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAG 110654 || | || ||| || | ||||||||||||||| |||||||||| || ||| || Sbjct 2677 GTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAG 2618 Query 110655 GTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGAT 110714 ||| ||| |||| ||| || | || ||||| |||||| || | || || | || Sbjct 2617 GTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGAC 2558 Query 110715 ATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGC 110768 ||| | ||||| || || || |||| ||| | || ||| | | || || | Sbjct 2557 ATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC---AGGGCGCTTGTTGCCACC 2501 Query 110769 CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGA 110828 ||||| ||||||||| || ||| |||||||| | ||||| || | || || | || Sbjct 2500 CTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGA 2441 Query 110829 TTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACC 110888 || || || || ||| || |||| || || ||||| | || || Sbjct 2440 CGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCC 2381 Query 110889 AATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCAT 110947 ||||||||| ||| ||| || |||| | ||| | || ||| | || ||||| | Sbjct 2380 AATACCACCGGCCATCTTGGAGATCATAGCACAAGTCT-TCAGCGTATCGTAGATACCCT 2322 Query 110948 CAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTC 111007 |||| || |||| || | | | ||||| || || | ||| | | ||||| | Sbjct 2321 CAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGC 2262 Query 111008 CCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT--GGGACATCTTGTTGTA 111065 | || ||||| || ||||||| || || |||| || ||| |||||| | |||||| Sbjct 2261 CAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAG--CTTACTGGACATGTAGTTGTA 2204 Query 111066 TGTGTCGAG 111074 || ||||| Sbjct 2203 CGTCTCGAG 2195 >seq53 Length=118516 Score = 123 bits (136), Expect = 3e-23 Identities = 210/301 (70%), Gaps = 5/301 (2%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || ||||| ||||| || ||||| ||| ||| || || Sbjct 90046 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCC 90105 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||| || || | || ||||||||||||| ||| ||||||||||||||| Sbjct 90106 GGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAGAT 90165 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACT-TGTC---GA 119670 ||| || ||| || ||||||| ||| |||| ||||||| || || || |||| || Sbjct 90166 GCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAA-GTTGATTCTCTGTCGCAGA 90224 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||||||||||||||||| ||| || || ||||||||| | || | || || | || Sbjct 90225 TCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGA 90284 Query 119731 AAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCT 119790 | || | | | | ||| |||||||| || |||| || | ||||||||||| Sbjct 90285 ACAGGTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCT 90344 Query 119791 C 119791 | Sbjct 90345 C 90345 >seq298 Length=37418 Score = 120 bits (132), Expect = 4e-22 Identities = 336/504 (67%), Gaps = 24/504 (5%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||||||||||||||| || | | | || | ||| || ||||| | ||||| || | Sbjct 33290 ACGATCGAAACGACCAGGCCTCATCAACGCCTTATCCAGGATATCCGCGCGGTTCGTGCC 33231 Query 11562 GGCAATGACTACAA--TGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 |||| || || | ||| | | ||| |||||| |||||||| || || | ||| Sbjct 33230 AGCAAGAACGACGACTTGCTCGGCCG--TGTTGAAACCATCCATTTCAGTCAGGATCTGA 33173 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTC--TT-- 11675 || | |||| |||||||| |||||| | | ||| ||| | | || || Sbjct 33172 TTCAGCGTCGACTCACGCTCGTCGTTGCCG--CCGCCCA--TGCGGTTAGAGTCCGTTCT 33117 Query 11676 --ACCGAC----AGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC 11729 |||| | |||||| || || |||||||| || || |||||| ||| || || Sbjct 33116 GGACCGGCCAATAGCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGC 33057 Query 11730 CTGTTCGAAA-AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788 ||| ||| || || ||||||||| | || ||||| || ||||| || || || | Sbjct 33056 -TGTCGCAAACAGATCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACT 32998 Query 11789 TTGCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAG 11846 | | || || ||||||| ||| || || |||||| || || | || ||| || Sbjct 32997 CGGAGCCGCTGA-CACTGAA-GAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAG 32940 Query 11847 GAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 || |||||||| || ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 32939 AAGTGTCTTACCGGTGCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACC 32880 Query 11907 ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTT 11966 | | || | ||||||||||||||| || | ||||| |||| | ||| | || Sbjct 32879 AAGACGCAAAAACTTCTCAGGCTTCTTGAGAAACTGCACAAACTCCATGATCTCCACTTT 32820 Query 11967 GGCGGAGTCGATACCCTCAACATC 11990 || || ||||| ||||||| Sbjct 32819 AGCCTCATCCATACCGGCAACATC 32796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969528626200