Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq76 242 4e-59 seq298 113 5e-20 >seq76 Length=103561 Score = 242 bits (268), Expect = 4e-59 Identities = 898/1391 (65%), Gaps = 41/1391 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | |||||||| || |||||||| || || |||| |||||| | ||| || Sbjct 3513 TAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAA 3454 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || |||||||| || || | | || ||| || | ||| | | |||||| |||| Sbjct 3453 GCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCT 3394 Query 106055 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113 ||||| ||||||| | | ||| || | || |||| |||| || || || || Sbjct 3393 TTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCC-ACATGTCGAACTGCAG 3335 Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173 | ||||| || ||||| |||||| | ||| |||| |||| || | ||| | Sbjct 3334 AATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAAT 3275 Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233 || || || |||| ||||| || ||||| || || || | ||||| | Sbjct 3274 CTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGT 3215 Query 106234 CTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 ||| || | || || || ||||||| | | || |||| || ||| Sbjct 3214 GCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGG-----CATCGGCTAGA 3160 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345 || |||||||| | |||||||| | ||| |||||||| || | || ||| Sbjct 3159 CCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGC 3103 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 ||||||||| |||| ||| |||| ||||| || || || | ||| ||||| Sbjct 3102 ACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATC 3043 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 || || || || | | ||| | || | | | || |||| || || ||||| Sbjct 3042 TCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCC 2983 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 | || |||| |||||| ||||| |||||| | |||||| | || || || Sbjct 2982 AGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTG 2923 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 |||| |||||| || || || |||| ||||| ||||| ||||| ||||||| ||| Sbjct 2922 CACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCA 2863 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 |||||||| |||||| | || | || ||||| || || | || ||| || || | ||| Sbjct 2862 TCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCAT 2803 Query 106646 A-CATCGGCGGCTGGTACAATG--GCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTA 106701 | | || | | || | ||| | | |||| || ||||| |||||||||| ||| Sbjct 2802 AGCTTCTGGGCCTTG----ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTA 2747 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 || || || ||||| ||||| ||||| ||||| || || || || || | Sbjct 2746 CAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACAT 2687 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 || | ||| | | || ||| || ||||||||||| ||||| ||||||||||||| Sbjct 2686 GAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGC 2627 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881 | || || || | ||| ||| || | || ||||| |||| || ||||| Sbjct 2626 TAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAA 2567 Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGAC 106937 ||| | || ||| || ||||| ||||| || |||| || | | ||| | | | Sbjct 2566 CTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTT 2507 Query 106938 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997 | ||| | || | |||||||| || ||| ||| || ||||| ||||| || | || | Sbjct 2506 G-CCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGC 2448 Query 106998 CATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATGGAT 107055 | | ||| || || || || || |||||| |||| | | | |||| Sbjct 2447 CGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAG--CCGGTGGCGCGGATACGGTGGAC 2390 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115 || || |||||||| || ||| ||| ||||| ||||| | | || || | || Sbjct 2389 GTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTA 2330 Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175 |||||| | || ||| ||||| || ||| | |||||| || | ||| || || Sbjct 2329 GATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCT 2271 Query 107176 -TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT--GGGACAT 107232 || || ||||| ||||| || || |||| ||||| ||| | | ||| |||||| Sbjct 2270 GCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGACAT 2213 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 | || ||| ||||| | ||| || | || || ||| |||| ||| ||||| Sbjct 2212 GTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACG 2153 Query 107293 CATAAACATGT 107303 ||| | ||||| Sbjct 2152 CATGATCATGT 2142 >seq298 Length=37418 Score = 113 bits (124), Expect = 5e-20 Identities = 216/316 (68%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 || || || || || ||||| ||||| || ||| |||| |||||| | |||| ||| Sbjct 33103 GCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCAAACAGA 33044 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490 ||||| || | | ||| ||||| |||||||| |||||||| | | | || ||| Sbjct 33043 TCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGACA 32984 Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 || | ||| || || ||| || || ||| | || || ||||| |||||||| || Sbjct 32983 CTGAA-GAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGGT 32925 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9610 || || ||| | |||| |||||| || ||||||||||| ||| | || | | Sbjct 32924 GCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCAAGACGCAAAAACTT 32865 Query 9611 CTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 9670 |||||| | ||||||||| | ||||| ||| | || |||| || | || || || Sbjct 32864 CTCAGGCTTCTTGAGAAACTGCACAAACTCCATGATCTCCACTTTAGCCTCATCCATACC 32805 Query 9671 CTCAACATCGGTAAAC 9686 ||||||| | |||| Sbjct 32804 GGCAACATCTGCAAAC 32789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974317585960