Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq76 242 4e-59
seq298 113 5e-20
>seq76
Length=103561
Score = 242 bits (268), Expect = 4e-59
Identities = 898/1391 (65%), Gaps = 41/1391 (3%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|||||||| | |||||||| || |||||||| || || |||| |||||| | ||| ||
Sbjct 3513 TAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAA 3454
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| |||||||| || || | | || ||| || | ||| | | |||||| ||||
Sbjct 3453 GCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCT 3394
Query 106055 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113
||||| ||||||| | | ||| || | || |||| |||| || || || ||
Sbjct 3393 TTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCC-ACATGTCGAACTGCAG 3335
Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173
| ||||| || ||||| |||||| | ||| |||| |||| || | ||| |
Sbjct 3334 AATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAAT 3275
Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233
|| || || |||| ||||| || ||||| || || || | ||||| |
Sbjct 3274 CTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGT 3215
Query 106234 CTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288
||| || | || || || ||||||| | | || |||| || |||
Sbjct 3214 GCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGG-----CATCGGCTAGA 3160
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345
|| |||||||| | |||||||| | ||| |||||||| || | || |||
Sbjct 3159 CCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGC 3103
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405
||||||||| |||| ||| |||| ||||| || || || | ||| |||||
Sbjct 3102 ACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATC 3043
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
|| || || || | | ||| | || | | | || |||| || || |||||
Sbjct 3042 TCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCC 2983
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
| || |||| |||||| ||||| |||||| | |||||| | || || ||
Sbjct 2982 AGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTG 2923
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||| |||||| || || || |||| ||||| ||||| ||||| ||||||| |||
Sbjct 2922 CACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCA 2863
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645
|||||||| |||||| | || | || ||||| || || | || ||| || || | |||
Sbjct 2862 TCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCAT 2803
Query 106646 A-CATCGGCGGCTGGTACAATG--GCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTA 106701
| | || | | || | ||| | | |||| || ||||| |||||||||| |||
Sbjct 2802 AGCTTCTGGGCCTTG----ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTA 2747
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761
|| || || ||||| ||||| ||||| ||||| || || || || || |
Sbjct 2746 CAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACAT 2687
Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
|| | ||| | | || ||| || ||||||||||| ||||| |||||||||||||
Sbjct 2686 GAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGC 2627
Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881
| || || || | ||| ||| || | || ||||| |||| || |||||
Sbjct 2626 TAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAA 2567
Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGAC 106937
||| | || ||| || ||||| ||||| || |||| || | | ||| | | |
Sbjct 2566 CTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTT 2507
Query 106938 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997
| ||| | || | |||||||| || ||| ||| || ||||| ||||| || | || |
Sbjct 2506 G-CCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGC 2448
Query 106998 CATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATGGAT 107055
| | ||| || || || || || |||||| |||| | | | ||||
Sbjct 2447 CGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAG--CCGGTGGCGCGGATACGGTGGAC 2390
Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115
|| || |||||||| || ||| ||| ||||| ||||| | | || || | ||
Sbjct 2389 GTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTA 2330
Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175
|||||| | || ||| ||||| || ||| | |||||| || | ||| || ||
Sbjct 2329 GATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCT 2271
Query 107176 -TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT--GGGACAT 107232
|| || ||||| ||||| || || |||| ||||| ||| | | ||| ||||||
Sbjct 2270 GCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGACAT 2213
Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292
| || ||| ||||| | ||| || | || || ||| |||| ||| |||||
Sbjct 2212 GTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACG 2153
Query 107293 CATAAACATGT 107303
||| | |||||
Sbjct 2152 CATGATCATGT 2142
>seq298
Length=37418
Score = 113 bits (124), Expect = 5e-20
Identities = 216/316 (68%), Gaps = 2/316 (1%)
Strand=Plus/Minus
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
|| || || || || ||||| ||||| || ||| |||| |||||| | |||| |||
Sbjct 33103 GCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCAAACAGA 33044
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490
||||| || | | ||| ||||| |||||||| |||||||| | | | || |||
Sbjct 33043 TCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGACA 32984
Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
|| | ||| || || ||| || || ||| | || || ||||| |||||||| ||
Sbjct 32983 CTGAA-GAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGGT 32925
Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9610
|| || ||| | |||| |||||| || ||||||||||| ||| | || | |
Sbjct 32924 GCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCAAGACGCAAAAACTT 32865
Query 9611 CTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 9670
|||||| | ||||||||| | ||||| ||| | || |||| || | || || ||
Sbjct 32864 CTCAGGCTTCTTGAGAAACTGCACAAACTCCATGATCTCCACTTTAGCCTCATCCATACC 32805
Query 9671 CTCAACATCGGTAAAC 9686
||||||| | ||||
Sbjct 32804 GGCAACATCTGCAAAC 32789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974317585960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |