Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq249 127 5e-24 >seq249 Length=46353 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || ||||||||||| |||||||| ||||| |||| || || | ||||| || Sbjct 8324 AACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTC 8265 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || || || || || || || |||||||| || || || |||||||| Sbjct 8264 CAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTG 8205 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||| || ||||| || || || ||| ||||| ||||| | || || Sbjct 8204 GATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTT 8145 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | |||||| Sbjct 8144 GCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || ||||||||||| ||||| || ||||| || | || || | ||||| || Sbjct 8096 AACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTC 8037 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || || || || || || || || ||||| || || || |||||||| Sbjct 8036 CAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTG 7977 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||| || ||||| || || || ||| ||||| ||||| | ||||| Sbjct 7976 GATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTCTT 7917 Query 195111 TCCTGTCAAAGTTTTTACGA 195130 ||| || | ||||| |||| Sbjct 7916 TCCGGTAAGGGTTTTGACGA 7897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109469104810193