Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq249 113 3e-20
>seq249
Length=46353
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || |||||||| ||||| || ||| | || |||| |||||||| || ||||||||
Sbjct 8305 TCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAA 8246
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | ||||||||||| |||||| ||||||
Sbjct 8245 ATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTGACATTG 8186
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || || || || | ||| |||||||| || ||||||||||| |||
Sbjct 8185 TCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACA 8126
Query 34971 AAGATCTGCATA 34982
|| || ||||||
Sbjct 8125 AAAATTTGCATA 8114
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || || ||||| ||||| || || | || |||| |||| ||| || ||||||||
Sbjct 8533 TCCTTTTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAA 8474
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | |||||||| || |||||| ||||||
Sbjct 8473 ATCAGACGCTGCTGATCTGGGGGAATACCCTCCTTATCTTGGATCTTCGATTTGACATTG 8414
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | |||||| || | ||| |||||||| || ||||||||||| ||
Sbjct 8413 TCAATAGTATCAGAAGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACG 8354
Query 34971 AAGATCTGCATA 34982
||||| ||||||
Sbjct 8353 AAGATTTGCATA 8342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630122261112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |