Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq76 356 4e-93 seq53 150 3e-31 >seq76 Length=103561 Score = 356 bits (394), Expect = 4e-93 Identities = 889/1336 (67%), Gaps = 37/1336 (3%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | | ||| | | ||||| | ||| ||||||||| Sbjct 3555 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAG 3496 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || |||||||| ||||| || || | || || || |||||||| || Sbjct 3495 GGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCT 3436 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || || ||| | ||| ||||||| ||| | ||| ||||||||| Sbjct 3435 AGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCC 3376 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||||| | | || ||||||||||| ||||||| ||||||| Sbjct 3375 CA---------CAGGTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGC 3325 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || || ||||| || | ||||||| ||| | || || | |||||| || Sbjct 3324 GAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAG 3265 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || ||||| |||| ||||||||| || || |||| | | || ||| | |||||| Sbjct 3264 GCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCG 3205 Query 213267 GGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 | ||| ||||||||| | | || | |||| |||| || || ||||| || || | Sbjct 3204 GCAGACTCGAAGGGCATGCGTAGAGC-TAGGAAGGCATCGGCTAGACCCTGAACACCAAC 3146 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 || || || | ||| | || || || |||| ||| || ||| ||| | ||| Sbjct 3145 TCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC-CTCGGGCACGGGATAATAATTGA 3087 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 ||||||||| ||| |||||||| | | || ||||||| | | ||| | || | Sbjct 3086 CGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGA 3027 Query 213445 GATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501 | || || ||| || | |||||| || ||||| | |||||| | Sbjct 3026 AGTCATACTCG---CCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGAGGCCAGAT 2970 Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561 |||| || || ||||| | || | | |||||| ||||||||||||||||||||| || Sbjct 2969 TGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGC 2910 Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCA 213621 ||||| ||||||||||||| ||||| ||| |||| | ||||||||| |||| Sbjct 2909 TGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCA 2850 Query 213622 TGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCT 213681 || | ||| |||||||| |||| | | || || | ||| || | | ||||| Sbjct 2849 TGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTTCTGGGCCT 2790 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 ||| | | | || ||| | | || |||||||| |||||| || | | ||| Sbjct 2789 TGATG----GTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAAC 2734 Query 213741 TCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCC 213800 |||| || || | |||| || || || ||| |||||||| |||||| Sbjct 2733 TCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTG 2674 Query 213801 CCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859 ||| | |||| ||| | || |||||||||||| || | |||||| || ||||||||| Sbjct 2673 GCGTTCTTCTC-GACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTC 2615 Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919 | || | |||| ||| || ||| ||||| || || || || || |||| || Sbjct 2614 GCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATC 2555 Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTC 213976 || ||||||||||| | |||||| |||||||| || | || | ||||| |||||||| Sbjct 2554 GGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTC 2495 Query 213977 CACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCC 214036 || | ||| ||||||||| |||||| | ||| || | ||||| ||| || Sbjct 2494 AACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCC 2435 Query 214037 GTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTAT 214093 ||| || || || || |||||||||| ||| | | ||| | | | || || || Sbjct 2434 GTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGG---ACGTTCAGGCCAAT 2378 Query 214094 GCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCAT 214153 |||||||| |||||||||||| || || | ||| || || ||| || | || Sbjct 2377 ACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAAT 2318 Query 214154 GCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAG 214212 ||||||||| | | || | ||||||||| ||| |||| ||||||| | || ||||| Sbjct 2317 GCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCT-GGGCCTGCGGCGTGCCAG 2259 Query 214213 AGTTGAAAAGCGTGGG 214228 |||||| ||||| || Sbjct 2258 CGTTGAACAGCGTAGG 2243 >seq53 Length=118516 Score = 150 bits (166), Expect = 3e-31 Identities = 552/850 (65%), Gaps = 26/850 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| || ||||| ||||| ||| ||| || |||||||| Sbjct 89755 CTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTC 89814 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||||||||||| | |||||| |||| ||| | ||| | Sbjct 89815 CATGAAGTCGAAGGGGTTGGTAGCACGGTACACCT-TGTCGTTGCCAAGGG--CCACTAA 89871 Query 47959 GTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 | || || || ||| |||| || || | ||| ||| ||||||||| ||| Sbjct 89872 GAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GAG 89928 Query 48016 GGACACG---GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | || || | ||||| || || ||||||||||| || ||||| || | Sbjct 89929 TAAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGAT 89988 Query 48073 AATCTGCTTAACGCGGGACTCTG--AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 || |||| || | || || |||| |||| |||||| || | | || | Sbjct 89989 GATTTGCTCGACAAGTTCCT-TGCCAGGGCG-GTTGTTCAGGTG---GGAGAACAACAGG 90043 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| || || || || || ||| |||| || ||| || Sbjct 90044 CAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGG 90103 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | || | || ||||| || || | || || | ||||| |||||| Sbjct 90104 CCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAG 90163 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT-TGTCTGA 48309 ||||| || || || || || ||| | || | || | |||| | |||| |||| | Sbjct 90164 ATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGA-TTCTCTGTCGCA 90222 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTT-CTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 |||||| || |||||||| || || | | | ||||| || || || || || || Sbjct 90223 GATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGT-ATGCAGGGAATGGTGTCAATAGCGT 90281 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 ||| || | | ||| || | | ||| || || ||| || || | | ||| Sbjct 90282 TGAACAGGTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGG 90341 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| || |||||| | |||||| | Sbjct 90342 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGA 90401 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || ||||| | ||| | ||| ||||| |||||||| ||||| || |||| Sbjct 90402 TCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAG 90461 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605 |||||||||| || | || | ||| | |||||| | ||| | | |||| Sbjct 90462 CAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCC 90521 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | |||||| || || | || || |||||||||| || || || | Sbjct 90522 AGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCT 90581 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 90582 TCTTGTACAT 90591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522564783360