Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq76 356 4e-93
seq53 150 3e-31
>seq76
Length=103561
Score = 356 bits (394), Expect = 4e-93
Identities = 889/1336 (67%), Gaps = 37/1336 (3%)
Strand=Plus/Minus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | | ||| | | ||||| | ||| |||||||||
Sbjct 3555 GGGTTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAG 3496
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||||| || |||||||| ||||| || || | || || || |||||||| ||
Sbjct 3495 GGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCT 3436
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
| || || ||| | ||| ||||||| ||| | ||| |||||||||
Sbjct 3435 AGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCC 3376
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
|| |||||| | | || ||||||||||| ||||||| |||||||
Sbjct 3375 CA---------CAGGTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGC 3325
Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206
|| || ||||| || | ||||||| ||| | || || | |||||| ||
Sbjct 3324 GAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAG 3265
Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266
|| ||||| |||| ||||||||| || || |||| | | || ||| | ||||||
Sbjct 3264 GCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCG 3205
Query 213267 GGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
| ||| ||||||||| | | || | |||| |||| || || ||||| || || |
Sbjct 3204 GCAGACTCGAAGGGCATGCGTAGAGC-TAGGAAGGCATCGGCTAGACCCTGAACACCAAC 3146
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| || || | ||| | || || || |||| ||| || ||| ||| | |||
Sbjct 3145 TCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC-CTCGGGCACGGGATAATAATTGA 3087
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
||||||||| ||| |||||||| | | || ||||||| | | ||| | || |
Sbjct 3086 CGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGA 3027
Query 213445 GATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501
| || || ||| || | |||||| || ||||| | |||||| |
Sbjct 3026 AGTCATACTCG---CCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGAGGCCAGAT 2970
Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561
|||| || || ||||| | || | | |||||| ||||||||||||||||||||| ||
Sbjct 2969 TGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGC 2910
Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCA 213621
||||| ||||||||||||| ||||| ||| |||| | ||||||||| ||||
Sbjct 2909 TGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCA 2850
Query 213622 TGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCT 213681
|| | ||| |||||||| |||| | | || || | ||| || | | |||||
Sbjct 2849 TGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTTCTGGGCCT 2790
Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAAT 213740
||| | | | || ||| | | || |||||||| |||||| || | | |||
Sbjct 2789 TGATG----GTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCGAAC 2734
Query 213741 TCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCC 213800
|||| || || | |||| || || || ||| |||||||| ||||||
Sbjct 2733 TCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTG 2674
Query 213801 CCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859
||| | |||| ||| | || |||||||||||| || | |||||| || |||||||||
Sbjct 2673 GCGTTCTTCTC-GACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTC 2615
Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919
| || | |||| ||| || ||| ||||| || || || || || |||| ||
Sbjct 2614 GCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATC 2555
Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTC 213976
|| ||||||||||| | |||||| |||||||| || | || | ||||| ||||||||
Sbjct 2554 GGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTC 2495
Query 213977 CACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCC 214036
|| | ||| ||||||||| |||||| | ||| || | ||||| ||| ||
Sbjct 2494 AACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCC 2435
Query 214037 GTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTAT 214093
||| || || || || |||||||||| ||| | | ||| | | | || || ||
Sbjct 2434 GTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGG---ACGTTCAGGCCAAT 2378
Query 214094 GCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCAT 214153
|||||||| |||||||||||| || || | ||| || || ||| || | ||
Sbjct 2377 ACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAAT 2318
Query 214154 GCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAG 214212
||||||||| | | || | ||||||||| ||| |||| ||||||| | || |||||
Sbjct 2317 GCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCT-GGGCCTGCGGCGTGCCAG 2259
Query 214213 AGTTGAAAAGCGTGGG 214228
|||||| ||||| ||
Sbjct 2258 CGTTGAACAGCGTAGG 2243
>seq53
Length=118516
Score = 150 bits (166), Expect = 3e-31
Identities = 552/850 (65%), Gaps = 26/850 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| || ||||| ||||| ||| ||| || ||||||||
Sbjct 89755 CTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTC 89814
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| ||||||||||| | |||||| |||| ||| | ||| |
Sbjct 89815 CATGAAGTCGAAGGGGTTGGTAGCACGGTACACCT-TGTCGTTGCCAAGGG--CCACTAA 89871
Query 47959 GTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
| || || || ||| |||| || || | ||| ||| ||||||||| |||
Sbjct 89872 GAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GAG 89928
Query 48016 GGACACG---GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072
| || || | ||||| || || ||||||||||| || ||||| || |
Sbjct 89929 TAAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGAT 89988
Query 48073 AATCTGCTTAACGCGGGACTCTG--AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130
|| |||| || | || || |||| |||| |||||| || | | || |
Sbjct 89989 GATTTGCTCGACAAGTTCCT-TGCCAGGGCG-GTTGTTCAGGTG---GGAGAACAACAGG 90043
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||||||||| |||||| || || || || || ||| |||| || ||| ||
Sbjct 90044 CAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGG 90103
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|| ||||| | || | || ||||| || || | || || | ||||| ||||||
Sbjct 90104 CCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAG 90163
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT-TGTCTGA 48309
||||| || || || || || ||| | || | || | |||| | |||| |||| |
Sbjct 90164 ATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGA-TTCTCTGTCGCA 90222
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTT-CTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
|||||| || |||||||| || || | | | ||||| || || || || || ||
Sbjct 90223 GATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGT-ATGCAGGGAATGGTGTCAATAGCGT 90281
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428
||| || | | ||| || | | ||| || || ||| || || | | |||
Sbjct 90282 TGAACAGGTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGG 90341
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||||||||| || |||||| | |||||| |
Sbjct 90342 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGA 90401
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || || ||||| | ||| | ||| ||||| |||||||| ||||| || ||||
Sbjct 90402 TCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAG 90461
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605
|||||||||| || | || | ||| | |||||| | ||| | | ||||
Sbjct 90462 CAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCC 90521
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | |||||| || || | || || |||||||||| || || || |
Sbjct 90522 AGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCT 90581
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 90582 TCTTGTACAT 90591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931522564783360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |