Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq76 206 5e-48 seq53 161 2e-34 >seq76 Length=103561 Score = 206 bits (228), Expect = 5e-48 Identities = 822/1273 (65%), Gaps = 37/1273 (3%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 || ||||| ||||||||||||||||| || ||| ||| || || | |||||||| | Sbjct 3261 GTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCA 3202 Query 221477 GAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || ||||||||| || || | || | ||| | ||||| || ||||| || || | || Sbjct 3201 GACTCGAAGGGCATGCGTAG-AGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCC 3143 Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 || || | ||| | | | ||| || || |||||||||||| | |||||||| Sbjct 3142 AATAGGGCGGTGGCGCATATTGCTGTTATGAGCCTCGGGCACGGGATAATAATTGACGTC 3083 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 ||| | ||| ||||| | || ||| || | |||| |||||||||| Sbjct 3082 GATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGG----- 3028 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715 || | ||||||| || || || ||||| | |||||| | ||| Sbjct 3027 -AAGTCATACTCGCCCTTGTTGTAA------TCGACAAACGACGGTAGGGCCAGCGAGGC 2975 Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775 ||| || ||||| || ||||| || | | |||| |||||||| || || ||||| Sbjct 2974 CAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTT 2915 Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835 | || ||| || ||||||| || || || ||| | ||| || |||||||| Sbjct 2914 GGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTA 2855 Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCT 221895 ||||| || || || ||||| || ||| | || || || ||| || | ||| Sbjct 2854 CAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCT-TCT 2796 Query 221896 GGCGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGGTATAGAGCATGT 221954 || || | | | || |||||| ||| | | || || ||||| | Sbjct 2795 GGGCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCG-TACAGAGCCT-- 2739 Query 221955 CAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014 | |||| |||||||| ||| |||| || || ||| | ||| ||||| || ||| Sbjct 2738 CGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCC 2679 Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074 ||| ||| | | ||| | || |||||| ||||| || |||||||| || | || | Sbjct 2678 AGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACA 2619 Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134 | || | || || ||||||| ||||| ||| || | || || | ||||| || | Sbjct 2618 GGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGA 2559 Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194 || || ||||||||||| || |||| || | || || || |||||||||||||||| Sbjct 2558 CATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCT 2499 Query 222195 GATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGAT 222253 | | || ||| | | | |||||||| ||| || | || || | ||||| || Sbjct 2498 GGT-CAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGAC 2440 Query 222254 CGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-CAGACATG 222310 ||||| ||||| |||||||| ||| ||| | || ||| ||| | || | Sbjct 2439 GTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGC---GGATACGGTGGACGTTCAGG 2383 Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 || ||||||||||| || |||||||| || || |||| || || || ||| ||| Sbjct 2382 CCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCC 2323 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430 || || ||| ||||| | || | || || || ||||| | ||| | | | | Sbjct 2322 TCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTG 2263 Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC-CCCTAGACATCAGATCGTA 222489 | ||||| |||||||| || ||||||||| || ||| || ||||| | ||| Sbjct 2262 CCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAA-AAGCTTACTGGACATGTAGTTGTA 2204 Query 222490 CGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 |||||| | || | | ||| ||| ||| || | | | ||| | |||| || Sbjct 2203 CGTCTCGAGCACACGGTCGACACGGTCGCCCCAGATACCG-ACGGCAACACGCATGATCA 2145 Query 222549 TGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605 ||| ||| || | ||| || | | || | | || |||||| |||||| |||| Sbjct 2144 TGTGCTGCGGACGCTCGAC-GATCTTGCCGTCCAACT--TGAGCAGATACGATCGCTCCA 2088 Query 222606 GAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCA 222665 || || || |||||||| | | || |||||| | ||| || | ||| | ||||| Sbjct 2087 AGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGATGGCAGAGTCCA 2028 Query 222666 GCTCCGACTTGTG 222678 ||| |||||| Sbjct 2027 ACTCATCCTTGTG 2015 >seq53 Length=118516 Score = 161 bits (178), Expect = 2e-34 Identities = 557/859 (65%), Gaps = 28/859 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| ||||||||||||||||| | ||| |||||| || || ||||||||||| Sbjct 90600 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 90541 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 |||| || | ||| |||| || ||| || |||| ||||||||| | || || Sbjct 90540 TCCAAAGATCTCCACGACTGGAACAACCGGCT-TA-CCAAGGACGAGCAGTACTTCATCT 90483 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || | |||| |||||||| ||||||||||| ||||| |||||||| ||| ||| Sbjct 90482 CTCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGC 90423 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | || || ||| | ||||| || ||||| ||||||||||| | Sbjct 90422 GTTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGA 90363 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTC 25770 | || || | ||||| ||| || | | | | ||| || ||||||| || Sbjct 90362 TGGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGAT-ACTTACATTAAGGAGCCT 90304 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 ||| || | ||||| || || || ||| ||| |||| | || || Sbjct 90303 GCCCAGCGCACGTACCTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAGCC 90244 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAG-CGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | ||||||||| | | ||||| | || |||| |||| || | || Sbjct 90243 GACTGGGCTCTCAAGTGGATCTGC-GACAGAGAATCAACTTTTGCTCAGCGCCTAATCGC 90185 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT--- 25946 ||||||||||| || |||||||| || || | ||||| ||||||| ||||| Sbjct 90184 TTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGCG 90125 Query 25947 CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| | || | |||||||| ||| |||||| |||||||| || | || | Sbjct 90124 CAAGC----GTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATG 90069 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT 26065 ||||||| |||| || |||||||||||| | | | | |||| || | || || | Sbjct 90068 AGGGTCTGCACACTGACTTTGCCTGCCTGTTGTTCTC---CCACCTGAACAAC-CGCCCT 90013 Query 26066 CTCAAGAGAC-CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124 |||| || ||| | ||||||| || || || | || ||||||||||| | Sbjct 90012 GGCAAGGAACTTGTCGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTG 89953 Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACAT 26183 | ||||||||| | || || |||| || || || Sbjct 89952 ACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAAC-GCTGACCTGATGAAGCAGTATAT 89894 Query 26184 TGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC 26242 ||||| || ||||||| ||| | ||| | || || || || | ||| || | Sbjct 89893 TGAGTTCGTTGCCGACCGTCTCTTAGTGGC-CCTTGGCAACGACAAGGTGTACCGTGCTA 89835 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| |||||||| ||||| ||||| || ||| || ||||||||||| || || | Sbjct 89834 CCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGA 89775 Query 26303 AGAGGGTCGGCGACTATCA 26321 | | || || ||||| || Sbjct 89774 AACGTGTTGGTGACTACCA 89756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834594317760