Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq76 242 4e-59
seq298 87.8 2e-12
>seq76
Length=103561
Score = 242 bits (268), Expect = 4e-59
Identities = 907/1402 (65%), Gaps = 45/1402 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || || |||| ||| || || | || |||
Sbjct 2135 CCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGCGACCGTGTCGACCGTGTG 2194
Query 75272 TTGGAGACATACGACAAGATGTCCC--AAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| ||| || | |||||| ||| | | ||| ||||| |||| || || |
Sbjct 2195 CTCGAGACGTACAACTACATGTCCAGTAAGCTTT--TCACACACGCCTCACCTACGCTGT 2252
Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||| ||||| || || || || ||| | || |||||| | ||| || |||||
Sbjct 2253 TCAACGCTGGCACGCCGCAGGCC-CAGCTATCGTCATGCTTCTTGGTCGACATGAAGGAT 2311
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| ||||| ||| |||
Sbjct 2312 GACAGCATTGAGGGTATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCC 2371
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 75506
|| |||||||| || || |||| | | | |||| |||||| || || |
Sbjct 2372 GGTGGTATTGGCCTGAACGTCCACCGTATCCGCGCCACCGG--CTCGTACATTGCTGGCA 2429
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
| || || ||| | || || | || ||||| ||||| || ||| ||| || ||||
Sbjct 2430 CTAACGGCACGTCAAACGGCATCGTGCCCATGCTGCGCGTCTTCAACAACACCGCCCGCT 2489
Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|||| | || | | ||| | || || || | || ||||| | || || |||
Sbjct 2490 ATGTTGACCAGG-GTGGCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGG 2548
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
||||||||| || | |||||||| || |||| ||||| || | || ||| |||
Sbjct 2549 CATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGT 2608
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| || || || | ||||||||||||| ||||| ||||||||||| || ||| ||
Sbjct 2609 GCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAG 2668
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
| | ||| | || | || || || || || ||||| ||||| |||
Sbjct 2669 AACGCCAACTGGACACTCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTGCTACGGT 2728
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGACTGT 75861
|| ||||| || || || ||| |||||| || ||| ||||| | | | || ||
Sbjct 2729 GACGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAGCGAGGGCCGCGGC----CGCCTC- 2782
Query 75862 ACCAGCC--GCC--GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916
|||| | ||| || | | ||| | || || ||| | | || || ||||| ||||
Sbjct 2783 ACCATCAAGGCCCAGAAGCTATGGTACGCCATCCTCGAGGCCCAAACCGAGACCGGAAAC 2842
Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976
|| | ||||| ||||||||||| || |||| |||||| ||||| ||||| |||| ||
Sbjct 2843 CCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGCACT 2902
Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036
||| ||||| || || ||||| || || | |||||| | |||||| |||
Sbjct 2903 ATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGCGCCCCTGATGAGGTCGCT 2962
Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096
|| |||||| |||| || | ||||| || || |||| || | | | || | |
Sbjct 2963 GTGTGCAATCTGGCCTCGCTGGCCCTACCGTCGTTTGTCGATTACAACAAGGGCGAGTAT 3022
Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156
|| | | || || || || ||||| ||| | || || || ||||| ||||
Sbjct 3023 GACTTCCAGAAGCTGCACGAGATCACCAAGGTCGTCGTGCGCAACCTGAACCGCATCATC 3082
Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213
||| |||| ||||||||| ||| || | || |||||||| ||| | |||
Sbjct 3083 GACGTCAATTATTATCCCGTGCCCGAG---GCTCATAACAGCAATATGCGCCACCGCCCT 3139
Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----T 76268
||||| | |||||||| ||||| || |||| || | | ||||||| |
Sbjct 3140 ATTGGAGTTGGTGTTCAGGGTCTAGCCGATG-----CCTTCCTAGCTCTACGCATGCCCT 3194
Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328
| || || | || ||| | ||||| | || || || ||||| || |||||
Sbjct 3195 TCGAGTCTGCCGAGGCCCGCACGCTGAATAAGCAGATTTTCGAGACCATCTACCACGCCG 3254
Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388
|||| || || || | ||| | || |||| |||| ||| | |||||| |
Sbjct 3255 CCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAAGGCACCTACTCGACCTATGAGGGCT 3314
Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447
|||| | || ||||| | || ||||| || |||| |||| || | || ||| |
Sbjct 3315 CTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGT-GGAATGTCACCCCCAGCGACCTG 3373
Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507
| ||||||| ||||| |||| |||||| || | ||| | || ||| || |
Sbjct 3374 TGGGACTGGGCCTCGCTCAAAGAACAGATCAAGCAGCACGGTGTGCGAAACTCGCTGCTC 3433
Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567
| || || |||||||| || || ||| | |||||| |||| || || |||||||| ||
Sbjct 3434 CTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGGGCAACAACGAATGCTTCGAG 3493
Query 76568 CCATACACAACAAACATCTACC 76589
|| ||||| | ||||||||||
Sbjct 3494 CCCTACACTTCCAACATCTACC 3515
>seq298
Length=37418
Score = 87.8 bits (96), Expect = 2e-12
Identities = 330/508 (65%), Gaps = 16/508 (3%)
Strand=Plus/Plus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290
||| ||||| | ||||||||| | || |||| | ||| | |||||||||||| |||
Sbjct 32835 GAGTTTGTGCAGTTTCTCAAGAAGCCTGAGAAGTTTTTGCGTCTTGGTGCCAAGATTCCC 32894
Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350
|| || ||| | || | ||| || || || || ||||| || || || || |
Sbjct 32895 CGCGGTGCCATCCTGTCCGGTCCTCCTGGCACCGGTAAGACACTTCTGGCTAAGGCGACT 32954
Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAAACTTTGTGGAGATGT 175408
|| || || || || || ||| | ||||| || || | | | |||||||| ||||
Sbjct 32955 GCCGGCGAGTCTGGCGTACCTTTC-TTCAGTG-TCAGCGGCTCCGAGTTTGTGGAAATGT 33012
Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468
|||| ||||| || | | || |||||||| |||| | |||||| |||| ||
Sbjct 33013 TTGTCGGTGTCGGCCCTTCGCGTGTACGCGATCTGTTTGCGACAGCCCGCAAAAACTCAC 33072
Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG----CAACGCAGCGCTGGT 175524
| || ||||| ||||| || || || || || | ||| | |||| | | ||
Sbjct 33073 CGTGCATTGTTTTCATCGACGAAATCGACGCTATTGGCCGGTCCAGAACGGA-CTCTAAC 33131
Query 175525 GGTAT-GCCAGC--AAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATG 175581
| || | | || || |||||| | || || | ||||| | || || || |||
Sbjct 33132 CGCATGGGCGGCGGCAACGACGAGCGTGAGTCGACGCTGAATCAGATCCTGACTGAAATG 33191
Query 175582 GATGGCTTTGACAATGAGACTGGCA--TTGTGGTTATTGCGGCCACTAATCGCGTGGATA 175639
||||| || ||| | | ||| | || ||| |||| | ||| || |||| |||||
Sbjct 33192 GATGGTTTCAACA--CGGCCGAGCAAGTCGTCGTTCTTGCTGGCACGAACCGCGCGGATA 33249
Query 175640 TCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGATCCAAGTGGGTCTTC 175699
|||| ||| | || | | | || |||||||| ||||| | ||| | | | || |
Sbjct 33250 TCCTGGATAAGGCGTTGATGAGGCCTGGTCGTTTCGATCGTCACATCTACATCGATCGGC 33309
Query 175700 CAAGTGTGCGAGGTCGCAAGAAGATTTT 175727
||| | || |||||| || | || ||
Sbjct 33310 CAACTATGAAGGGTCGCGAGGATATCTT 33337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596563045191520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |