Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq76 242 4e-59 seq298 87.8 2e-12 >seq76 Length=103561 Score = 242 bits (268), Expect = 4e-59 Identities = 907/1402 (65%), Gaps = 45/1402 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || |||| ||| || || | || ||| Sbjct 2135 CCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGCGACCGTGTCGACCGTGTG 2194 Query 75272 TTGGAGACATACGACAAGATGTCCC--AAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||| ||| || | |||||| ||| | | ||| ||||| |||| || || | Sbjct 2195 CTCGAGACGTACAACTACATGTCCAGTAAGCTTT--TCACACACGCCTCACCTACGCTGT 2252 Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||| ||||| || || || || ||| | || |||||| | ||| || ||||| Sbjct 2253 TCAACGCTGGCACGCCGCAGGCC-CAGCTATCGTCATGCTTCTTGGTCGACATGAAGGAT 2311 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | |||||||| | || || | | ||||| ||||| ||| ||| Sbjct 2312 GACAGCATTGAGGGTATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCC 2371 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 75506 || |||||||| || || |||| | | | |||| |||||| || || | Sbjct 2372 GGTGGTATTGGCCTGAACGTCCACCGTATCCGCGCCACCGG--CTCGTACATTGCTGGCA 2429 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || || ||| | || || | || ||||| ||||| || ||| ||| || |||| Sbjct 2430 CTAACGGCACGTCAAACGGCATCGTGCCCATGCTGCGCGTCTTCAACAACACCGCCCGCT 2489 Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||| | || | | ||| | || || || | || ||||| | || || ||| Sbjct 2490 ATGTTGACCAGG-GTGGCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGG 2548 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||||||| || | |||||||| || |||| ||||| || | || ||| ||| Sbjct 2549 CATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGT 2608 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | || || || | ||||||||||||| ||||| ||||||||||| || ||| || Sbjct 2609 GCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAG 2668 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 | | ||| | || | || || || || || ||||| ||||| ||| Sbjct 2669 AACGCCAACTGGACACTCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTGCTACGGT 2728 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGACTGT 75861 || ||||| || || || ||| |||||| || ||| ||||| | | | || || Sbjct 2729 GACGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAGCGAGGGCCGCGGC----CGCCTC- 2782 Query 75862 ACCAGCC--GCC--GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 |||| | ||| || | | ||| | || || ||| | | || || ||||| |||| Sbjct 2783 ACCATCAAGGCCCAGAAGCTATGGTACGCCATCCTCGAGGCCCAAACCGAGACCGGAAAC 2842 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||| ||||||||||| || |||| |||||| ||||| ||||| |||| || Sbjct 2843 CCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGCACT 2902 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| || || ||||| || || | |||||| | |||||| ||| Sbjct 2903 ATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGCGCCCCTGATGAGGTCGCT 2962 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096 || |||||| |||| || | ||||| || || |||| || | | | || | | Sbjct 2963 GTGTGCAATCTGGCCTCGCTGGCCCTACCGTCGTTTGTCGATTACAACAAGGGCGAGTAT 3022 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | | || || || || ||||| ||| | || || || ||||| |||| Sbjct 3023 GACTTCCAGAAGCTGCACGAGATCACCAAGGTCGTCGTGCGCAACCTGAACCGCATCATC 3082 Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 ||| |||| ||||||||| ||| || | || |||||||| ||| | ||| Sbjct 3083 GACGTCAATTATTATCCCGTGCCCGAG---GCTCATAACAGCAATATGCGCCACCGCCCT 3139 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----T 76268 ||||| | |||||||| ||||| || |||| || | | ||||||| | Sbjct 3140 ATTGGAGTTGGTGTTCAGGGTCTAGCCGATG-----CCTTCCTAGCTCTACGCATGCCCT 3194 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || | || ||| | ||||| | || || || ||||| || ||||| Sbjct 3195 TCGAGTCTGCCGAGGCCCGCACGCTGAATAAGCAGATTTTCGAGACCATCTACCACGCCG 3254 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 |||| || || || | ||| | || |||| |||| ||| | |||||| | Sbjct 3255 CCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAAGGCACCTACTCGACCTATGAGGGCT 3314 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447 |||| | || ||||| | || ||||| || |||| |||| || | || ||| | Sbjct 3315 CTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGT-GGAATGTCACCCCCAGCGACCTG 3373 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | ||||||| ||||| |||| |||||| || | ||| | || ||| || | Sbjct 3374 TGGGACTGGGCCTCGCTCAAAGAACAGATCAAGCAGCACGGTGTGCGAAACTCGCTGCTC 3433 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 | || || |||||||| || || ||| | |||||| |||| || || |||||||| || Sbjct 3434 CTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGGGCAACAACGAATGCTTCGAG 3493 Query 76568 CCATACACAACAAACATCTACC 76589 || ||||| | |||||||||| Sbjct 3494 CCCTACACTTCCAACATCTACC 3515 >seq298 Length=37418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 330/508 (65%), Gaps = 16/508 (3%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| ||||| | ||||||||| | || |||| | ||| | |||||||||||| ||| Sbjct 32835 GAGTTTGTGCAGTTTCTCAAGAAGCCTGAGAAGTTTTTGCGTCTTGGTGCCAAGATTCCC 32894 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 || || ||| | || | ||| || || || || ||||| || || || || | Sbjct 32895 CGCGGTGCCATCCTGTCCGGTCCTCCTGGCACCGGTAAGACACTTCTGGCTAAGGCGACT 32954 Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAAACTTTGTGGAGATGT 175408 || || || || || || ||| | ||||| || || | | | |||||||| |||| Sbjct 32955 GCCGGCGAGTCTGGCGTACCTTTC-TTCAGTG-TCAGCGGCTCCGAGTTTGTGGAAATGT 33012 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||| ||||| || | | || |||||||| |||| | |||||| |||| || Sbjct 33013 TTGTCGGTGTCGGCCCTTCGCGTGTACGCGATCTGTTTGCGACAGCCCGCAAAAACTCAC 33072 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG----CAACGCAGCGCTGGT 175524 | || ||||| ||||| || || || || || | ||| | |||| | | || Sbjct 33073 CGTGCATTGTTTTCATCGACGAAATCGACGCTATTGGCCGGTCCAGAACGGA-CTCTAAC 33131 Query 175525 GGTAT-GCCAGC--AAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATG 175581 | || | | || || |||||| | || || | ||||| | || || || ||| Sbjct 33132 CGCATGGGCGGCGGCAACGACGAGCGTGAGTCGACGCTGAATCAGATCCTGACTGAAATG 33191 Query 175582 GATGGCTTTGACAATGAGACTGGCA--TTGTGGTTATTGCGGCCACTAATCGCGTGGATA 175639 ||||| || ||| | | ||| | || ||| |||| | ||| || |||| ||||| Sbjct 33192 GATGGTTTCAACA--CGGCCGAGCAAGTCGTCGTTCTTGCTGGCACGAACCGCGCGGATA 33249 Query 175640 TCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGATCCAAGTGGGTCTTC 175699 |||| ||| | || | | | || |||||||| ||||| | ||| | | | || | Sbjct 33250 TCCTGGATAAGGCGTTGATGAGGCCTGGTCGTTTCGATCGTCACATCTACATCGATCGGC 33309 Query 175700 CAAGTGTGCGAGGTCGCAAGAAGATTTT 175727 ||| | || |||||| || | || || Sbjct 33310 CAACTATGAAGGGTCGCGAGGATATCTT 33337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563045191520