Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq76 123 7e-23 seq309 122 3e-22 seq270 114 4e-20 seq53 104 7e-17 seq298 84.2 6e-11 >seq76 Length=103561 Score = 123 bits (136), Expect = 7e-23 Identities = 504/788 (64%), Gaps = 15/788 (2%) Strand=Plus/Minus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651 || |||||||| || || || ||| | | ||| ||| || | ||||| |||| Sbjct 2979 GAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCAC 2920 Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711 ||||| || || ||| ||||| | ||||||||||| || ||||| || |||||| Sbjct 2919 AGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCC 2860 Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGG 155771 ||||| || ||| | ||| |||| ||||| | || || || || || ||| || Sbjct 2859 TTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGC 2800 Query 155772 TCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTTCATATACAGCG 155829 | |||| || || | | | ||| || ||| || |||| || | ||| Sbjct 2799 TTCTGGGCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCC 2740 Query 155830 TTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCG 155889 | | | || |||||||| || || ||| || ||||||| | |||||| | || | Sbjct 2739 TC--GAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTG 2682 Query 155890 ACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 ||| | || || ||| |||||| ||| || | || ||| | || Sbjct 2681 TCCAGTTGGCGTTCTTCTCGA---CACGCTTCATGAACAGGTCGGGAATCCACAGGGCTA 2625 Query 155947 AGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATT 156006 ||| ||||| | || |||||| | |||||| ||||| ||||| || | ||| | Sbjct 2624 GGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACT 2565 Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---C 156063 | | ||| | ||| ||||| || || |||||||| ||| | |||| | Sbjct 2564 CGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGC 2505 Query 156064 CACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123 ||||||| || ||||| || || || || |||||||| | ||||| || | || || | Sbjct 2504 CACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGT 2445 Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTA 156183 | || ||||| || || || ||| | ||| || | | ||| | | || | | | Sbjct 2444 TTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCA 2385 Query 156184 GTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATA 156242 | ||||||||||| | |||| || || || ||| || ||| | |||| | | ||| Sbjct 2384 GGCCAATACCACC-GGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATA 2326 Query 156243 CCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGT 156302 || ||||| ||||| | ||| | | |||| || || || | | || Sbjct 2325 CCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGC 2266 Query 156303 GTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCG 156362 || ||||||||||| || ||||||| || || | ||| |||| | ||||| || | | Sbjct 2265 GTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAGTTG 2206 Query 156363 TATGTCTC 156370 || ||||| Sbjct 2205 TACGTCTC 2198 >seq309 Length=35318 Score = 122 bits (134), Expect = 3e-22 Identities = 206/296 (70%), Gaps = 2/296 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| || |||||| ||||| || |||||| | || || ||||| Sbjct 8961 TCTTCAAGAGCCTTGACTAGACGACGTTGAATGTATCCAGTTTCGGCAGTCTTGACAGCA 9020 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-G 302690 |||||||| | ||| |||||||| |||| || |||||||| | ||| || |||| | Sbjct 9021 GTATCAATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGCTTGG-CGTAAG 9079 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | ||| | ||||| || ||||| | |||||| |||| || ||||| Sbjct 9080 ACCACGAAGGTAAGAGTTTTCAACAAAGCCACGTGACTCGGGAGAATAATCATCTTTGGT 9139 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || || || | || || | || | || ||||||||||| || ||| | || Sbjct 9140 GAAGTGAGGAAGCGTACGGTACTTGAATCCAAAGGGAATACGCTTTCCTTCGACGATTTG 9199 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 || || | | | | ||||||| |||||||| | | ||| ||||| |||| Sbjct 9200 TTGACCGACCAAGGCAGTCATCTGGGAAATATTGATTGTAGAGCCTTTGGAACCAG 9255 >seq270 Length=41675 Score = 114 bits (126), Expect = 4e-20 Identities = 388/591 (66%), Gaps = 20/591 (3%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 ||||||||||| | | || | |||||| | | ||||||| || | ||| | | || Sbjct 24361 ATAAGACCACAGATCTCGCAGATATGGACACGGAAAGCATCCGAAACTTCAAACAAACGC 24302 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | |||||| |||||||| |||||||| |||||| Sbjct 24301 TCCTTCAGGAACGCAGCGGCACCGTGGGCAATCATGCAATCACGTTCCATTTCTCCGAAA 24242 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GATTAACCATAGG 251585 || ||||||||||| || || | ||| || | ||||| ||||| | |||| | || Sbjct 24241 CGCAGACCACCATCACGGGCACGACCTTCCACGGGCTGGCGAGTCATGATT-TGTACGGG 24183 Query 251586 ACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGC 251645 ||| || ||| || ||| || | ||||| || ||||| ||||| | | Sbjct 24182 ACCACGGGCACGGGCGTGGATCTTGTCGTCCACCATGTGACGCAGACGTTGGTAATAGGT 24123 Query 251646 GGGACCGATGAAGATGCTCGAAGGCA-TTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704 ||||||| ||||| || | ||| |||| || | | ||| |||| | | Sbjct 24122 AGGACCGAAGAAGACTTGCGCACGCAGCTTGC-GGCCTGAGTGGCCGTGGTACACACTCT 24064 Query 251705 CGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACC-AATC--- 251760 | ||| || | || ||| | | ||||| ||| | |||| |||| Sbjct 24063 CAAAACCACGCGACTGGTAGCCATGCTGGCGTAGC-----AGCGCTGACACCGAATCGAC 24009 Query 251761 -TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCC 251819 ||| | | || |||| | || || | | |||| || | | ||| || | Sbjct 24008 AGTGACATCAGTGAATGGGGTGGCATCACCCTCCATACCCTTTAGCGTGGCCACCTTACT 23949 Query 251820 TAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGAT 251879 ||||| ||| ||| ||||| || ||||||||| |||||||| || || ||||| Sbjct 23948 CAAAAGACACTCAATCAAATGGGCAATGGTCATACGAGAAGGAATAGCGTGAGGGTTGAT 23889 Query 251880 GATGATGTCGGGTTTCAGTCCATCAGCA-GTGAAGGGCATATCCTTTTCCTCAATAATGT 251938 || |||||||| | | || || ||| ||||| ||||||| ||| | | |||| || Sbjct 23888 AATAATGTCGGGAGTGATGCCCTC-GCAGGTGAACGGCATAT-CTTCTTGGCGATAA-GT 23832 Query 251939 T--TCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | ||||| || || || |||||||||||||| |||||||||||||| Sbjct 23831 TACACCAATGGTACCTTTCTGTCCGTGACGAGACGCAAACTTATCACCAAT 23781 >seq53 Length=118516 Score = 104 bits (114), Expect = 7e-17 Identities = 238/353 (67%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 133307 gAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366 || || ||| ||| ||||| | ||||| |||||| || ||||| || || || Sbjct 90396 GAGGCTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTAC 90337 Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGC 133425 ||| | || ||||||||||| || || | | |||| |||| || | |||||||| Sbjct 90336 TCTTTGTTGATCGATACTTACATTAAGGAGCCTGCCCAGC-GCACGTACCTGTTCAACGC 90278 Query 133426 CATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485 ||| | |||| || || ||| | ||||||||| | || |||||| || Sbjct 90277 TATTGACACCATTCCCTGCATACGCCGCAAAGCCGACTGGGCTCTCAAGTGGATCTGCGA 90218 Query 133486 CA-AGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544 || || | | | ||||||| || || | |||||||||| || || ||||| || | Sbjct 90217 CAGAGAAT-CAACTTTTGCTCAGCGCCTAATCGCTTTTGCTGCTGTCGAAGGCATCTTCT 90159 Query 133545 tCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 | ||| || || ||| || |||||||| ||||||||| | | || || ||| Sbjct 90158 TTTCTGGAGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGA 90099 Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 ||||||||||| || ||||| | || |||| || ||||| || |||||| Sbjct 90098 CCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTGCC 90046 >seq298 Length=37418 Score = 84.2 bits (92), Expect = 6e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| ||| || |||||||| ||||||| | ||||| || |||| | || | ||| Sbjct 33109 CCAATAGCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCA 33050 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | || | |||||| || | || | ||| ||| ||||||| ||||| || || || Sbjct 33049 AACAGATCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCG 32990 Query 289150 --GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 || ||| ||| ||| | ||| | ||||| || ||| | ||||||||||||| Sbjct 32989 CTGACACT-GAA-GAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCT 32932 Query 289208 TACCTGTTCCAGGTGGTCC 289226 |||| || ||||| || || Sbjct 32931 TACCGGTGCCAGGAGGACC 32913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471801024114223