Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq76 221 1e-52 seq249 131 2e-25 seq133 82.4 7e-11 >seq76 Length=103561 Score = 221 bits (244), Expect = 1e-52 Identities = 895/1388 (64%), Gaps = 54/1388 (4%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || || || ||||| || ||||| ||| |||||| ||| | || Sbjct 3553 GTTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGG 3494 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || |||||||||| ||||| || |||| || | || || |||||| || | Sbjct 3493 CTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAG 3434 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 | || || || || | |||||| ||||||| |||| |||||||| | ||||||||| Sbjct 3433 GAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCA 3374 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCG----- 138735 || ||||| || | |||||||| ||| |||| | || | |||||| Sbjct 3373 CAGGTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGC-----CTTGCGAAACA 3319 Query 138736 GGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCG 138795 ||| ||| || || | ||| || || || | |||| || Sbjct 3318 GGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTT 3259 Query 138796 AGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTC 138855 || || | | ||| || || ||| |||||||| ||| ||| ||||||||||| | Sbjct 3258 AGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGAC 3199 Query 138856 TCGTACGGCATGCG--GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGA 138913 ||| | |||||||| |||| | | ||| || ||||| || || || || || ||||| | Sbjct 3198 TCGAAGGGCATGCGTAGAGC-TAG-GAAGGCATCGGCTAGACCCTGAACACCAACTCCAA 3141 Query 138914 CAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTCG---ATAGGATAATAGTTTACA 138969 |||||| ||||||| ||| ||| || | || ||| | |||||||| || || Sbjct 3140 TAGGGCGGTGGCGCATATT----GCTGTTATGAGCCTCGGGCACGGGATAATAATTGACG 3085 Query 138970 TCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAA 139028 |||||||| ||| | || |||||||| ||||| || | | | | | | | | || Sbjct 3084 TCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCT-CGTGCAGCTTCTGGAA 3026 Query 139029 ATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGC 139088 || || |||| ||||| ||||| | |||| || | | | |||||| Sbjct 3025 GTCATACTCGCCCTTGTTGTAATCGACAA--ACGAC-----GGTAGGGCC--AGCGAGGC 2975 Query 139089 TATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATT 139148 | |||||||| || || || || ||| ||| ||| |||| || |||| |||| || Sbjct 2974 CAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTT 2915 Query 139149 ACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTA 139208 | ||| || || | || | || ||||| || | ||| || ||||| ||||| Sbjct 2914 GGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTA 2855 Query 139209 AAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCC 139267 ||||| |||| | || || || ||| | ||| | ||| | | || || | Sbjct 2854 CAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGT--ACCATAGCTTC 2797 Query 139268 TAG--CTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTC 139325 | | |||| ||| || | | | |||| ||||||||||||||| || | || Sbjct 2796 TGGGCCTTGATGGTGAGGC-GGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCTC 2738 Query 139326 GAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACC 139384 ||| ||| ||||||||| ||| | ||| || | |||| || || |||||||| | || Sbjct 2737 GAACTCG-TCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCC 2679 Query 139385 ATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCA 139444 | | ||||| || ||| ||| |||||||||| || |||||||||| || | | || Sbjct 2678 AGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACA 2619 Query 139445 AATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAA 139502 ||||| || | || ||| || ||| || | | || ||||| || || Sbjct 2618 GGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTT--CTTGCGTAGGTCGAGGAACTCGAA 2561 Query 139503 AACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACC 139559 || || || ||||| || || || ||||| || | || || || |||||||| Sbjct 2560 GACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACC 2501 Query 139560 TTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGC 139619 || || || | || | | || ||||| ||||||| ||| ||| | | ||| | | Sbjct 2500 CTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGA 2441 Query 139620 TGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGAT 139676 || ||||| |||| | ||| | | | || || |||| || || || | Sbjct 2440 CGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTG---GCGCGGATACGGTGGACGTTCAG 2384 Query 139677 GCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACC 139736 ||| || || ||| | | ||||| || | | | ||| | || ||||| ||||| Sbjct 2383 GCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACC 2324 Query 139737 TCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGT 139796 |||||||| |||| ||| ||||| ||||||||||| || || | | ||| Sbjct 2323 CTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGT 2264 Query 139797 GCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTA 139856 ||| || ||||| ||||| ||||| ||||| | | | ||||| | | ||| Sbjct 2263 GCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAGTTGTA 2204 Query 139857 CGTTTCGA 139864 ||| |||| Sbjct 2203 CGTCTCGA 2196 >seq249 Length=46353 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || ||||| || || || ||||| ||| || || Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||||||||| || || || ||||| ||||| Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| |||||||| || |||||||||||| | | | | || || || ||| Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || || || |||| | || |||| || || Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8341 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| || ||||| || || || || || ||||| ||| || |||| || | || | Sbjct 7902 AAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTGACAAT 7961 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || ||| |||||||||||||| || || || ||||| ||||| || ||| |||| ||| Sbjct 7962 GTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGATTTTT 8021 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || |||||||||||| | | | | || || || ||||| |||||||| || Sbjct 8022 GCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGGAGTCC 8081 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || |||| | || |||| || || Sbjct 8082 ACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8113 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || ||||| || || || || || || | | Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||||||||| || || || || || || ||||| Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATCAG 8462 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| |||||||| || ||| |||||||| | | | || || || ||| Sbjct 8463 CAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAAC 8522 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| || || ||||| |||| |||| |||| |||||| Sbjct 8523 ATCCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGC 8570 >seq133 Length=77988 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || ||||| || || || || || | ||||| | || | Sbjct 32358 AAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATCGACAAC 32299 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| || || || || || || ||||| || ||||||| Sbjct 32298 GTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGATCTTC 32239 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 || || || ||||| |||||| | | |||| || || ||||| ||||||| Sbjct 32238 GCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAAGG 32184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892656750120