Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq21 100 2e-16
seq249 98.7 8e-16
>seq21
Length=160800
Score = 100 bits (110), Expect = 2e-16
Identities = 217/323 (67%), Gaps = 4/323 (1%)
Strand=Plus/Plus
Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370
||||| ||||||| ||||| | || | | || | ||||||||| ||||| ||
Sbjct 63452 GATGACGACAGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGACAATGAAGCC 63511
Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
| | | ||||| | ||| | ||| || || ||||||| ||| | || || |
Sbjct 63512 GTAGACGTGATCCTGCAGCTTCTTTGTGTCATGTGAACCGTTGATGATCCAGCGATCATC 63571
Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490
||| | | || || || ||||||||| | ||||||||||| || ||| |
Sbjct 63572 CGGAGGATCAATATTGGTCTGGGCACCCAGCTCGAAACCGAAGTACTTGATCAGGTGAGC 63631
Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550
| || || | |||| || ||||| | | || |||||| |||||||||||||| ||
Sbjct 63632 ACCAGGGCGAGCCAGCGACTGGGCGACGGCAGACAGGTTGACAATGACAGTCTTGATACC 63691
Query 34551 GTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608
|| || || || |||| ||| | | ||| || ||||| ||||| ||||||||| |
Sbjct 63692 ATTACCTTTACCCTCGATCTTAGTTTGAAGA--CGGGGCATCTTGTAACGGTAGAACTGG 63749
Query 34609 TCCGCCACATTGCGGTTAACGTT 34631
|| | |||| | |||| |||||
Sbjct 63750 TCGGTAACATCGGGGTTGACGTT 63772
>seq249
Length=46353
Score = 98.7 bits (108), Expect = 8e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGGAGCCTGA 110331
|||||||| |||||||| ||| | || ||||||||||| ||| | ||| || | |||
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCT-C 8173
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||||| | | | | || ||| |||||| ||||| || || | || |||||
Sbjct 8174 CGATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCA 8233
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| | || |||| ||| || || ||||||||||||| | | || | | || |||||
Sbjct 8234 GCAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAA 8293
Query 110452 CATTCAAAAAGAATCTAC 110469
||||||||| || || ||
Sbjct 8294 CATTCAAAAGGAGTCCAC 8311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412837177305347
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |