Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq76 176 7e-38
seq2 141 1e-27
seq164 118 2e-20
seq53 113 7e-19
>seq76
Length=103561
Score = 176 bits (194), Expect = 7e-38
Identities = 343/504 (68%), Gaps = 21/504 (4%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| |||||||| || |||| ||| |||||||| ||||||||||| | |||||| ||
Sbjct 2500 CTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGA 2441
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||| ||||| || | ||| | ||| | |||||| | ||| || | |||
Sbjct 2440 CGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCC 2381
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || |||||| ||||||||| | || || | |||||||| |||||||| |||||
Sbjct 2380 AATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTC 2321
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGC-GGGC--GCGCCGT 2073776
|| ||| |||||||||| | || ||||| ||||| | || |||| ||| |||
Sbjct 2320 AATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGA---TAGCTGGGCCTGCGGCGT 2264
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836
||| || ||||| ||||| || | || ||| | || ||||||| | |||
Sbjct 2263 GCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAGTTGTA 2204
Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896
|| ||||||| || | | | || |||| || || |||| |||
Sbjct 2203 CGTCTCGAGCACACG-GTCGACACG--------GTCG------CCCCAGATACCGACGGC 2159
Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTA 2073956
|| ||||||||||||| ||| || |||||||||| | || || |||| ||| ||
Sbjct 2158 AACACGCATGATCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTTGAGCAGATA 2099
Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016
|| || || ||| | |||||||||| |||| | ||| || |||| |||
Sbjct 2098 CGATCGCTCCAAGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGAT 2039
Query 2074017 GGCGGCGTCGAGGGCCTCCTTGTG 2074040
||| | ||| | | ||||||||
Sbjct 2038 GGCAGAGTCCAACTCATCCTTGTG 2015
Score = 147 bits (162), Expect = 3e-29
Identities = 297/443 (67%), Gaps = 8/443 (2%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||||||||||||||||| | || | ||||||||||||| ||||||
Sbjct 2939 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGGATAGTGCCCAGGTTCTTCTGGTT 2882
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| || |||| ||| ||||||| ||||||| | || || |||||| | || ||
Sbjct 2881 GCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGC 2822
Query 2071692 CGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNN 2071749
| || |||||| |||| | || | || | |||| | |||||||||
Sbjct 2821 CTCGAGGATGGCGTACCATAGCTTCTGGGCCTTGATGGTGAGG--CGGCCGCGGCCCTCG 2764
Query 2071750 NNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGC 2071809
| || || || || || | |||| ||| ||| ||| |||||
Sbjct 2763 CTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGG 2704
Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869
|||| ||||| | ||| | ||||| | || || | || || ||| ||||||
Sbjct 2703 CACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGG 2644
Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929
||| |||||||| | || || ||||| || || ||||||||||||||||||||
Sbjct 2643 TCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTC 2584
Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989
|| |||||||| | |||| || ||||| ||||||||||| |||||| ||||||
Sbjct 2583 TTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAG 2524
Query 2071990 GCGCCCTTGCGCTTGCCGCCGCC 2072012
|| || ||||||| ||| ||
Sbjct 2523 GCTCCAGGGCGCTTGTTGCCACC 2501
>seq2
Length=318682
Score = 141 bits (156), Expect = 1e-27
Identities = 177/240 (74%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 2019202 CCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGC 2019261
|||||||||| ||| | ||||||||||| || ||||||| | | || || | |||||||
Sbjct 37171 CCGGCCGCCATAAGCTTATCATCCTCGACGAAGCCGACTCCATGACTTCTGGTGCCCAGC 37230
Query 2019262 AGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGC 2019320
| ||||| || ||| || ||||||| ||| |||| || || || ||||| | ||||||
Sbjct 37231 AAGCCCTTCG-TCGTACGATGGAAATTTACTCCAATACTACCCGCTTTGCATTTGCCTGC 37289
Query 2019321 AACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCG 2019380
|| ||| | | |||| || |||| || |||||||| |||||||||| ||||
Sbjct 37290 AATCAGTCTAACAAGATCATTGAGCCCCTACAATCGCGTTGCGCTATCTTGCGCTATGCG 37349
Query 2019381 CGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440
|| || ||||||| || ||| | |||||| | |||| ||||| |||||| | |||
Sbjct 37350 CGTCTTACCGACGAACAAGTCGTCAAGCGTCTACTACAGATCATCGATGCCGAAGATGTC 37409
>seq164
Length=67468
Score = 118 bits (130), Expect = 2e-20
Identities = 91/108 (84%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||| |||||||| | || ||| | || ||||||||||| || |||
Sbjct 58797 GCCTCCAACTATCTCGATATCAAGCCTTTGCTGGATGTTGGCTGCAAGACCGTCGCAAAC 58856
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754
| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct 58857 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACATC 58904
>seq53
Length=118516
Score = 113 bits (124), Expect = 7e-19
Identities = 227/330 (69%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| |||| ||||| |||| ||||||||||| || || |||||
Sbjct 90064 ACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTT 90123
Query 794400 CTTGAGCCAAAAGATGGCA-CAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
||||||||||||| || | || || || || |||||||| ||||| || ||||
Sbjct 90124 GCGCAGCCAAAAGATGGAGGCAAAGGCT-CCAGAAAAGAAGATGCCTTCGACAGCAGCAA 90182
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTT-GTTGATCCACTTCATCGCC 794517
| ||| || |||| |||||||| | |||| | | ||||||||| | |||
Sbjct 90183 AAGCGATTAGGCGCTGAGCAAAAGTT----GATTCTCTGTCGCAGATCCACTTGAGAGCC 90238
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCTT 794576
|| || || || | | |||| | ||||| || ||| || |||| || |
Sbjct 90239 CAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAGGTACGTGCG- 90297
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
|| | | || ||||| | ||| || ||||| | | ||||||||||| |||||||||||
Sbjct 90298 CTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTT 90357
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| || ||||||||| ||||| |||||
Sbjct 90358 CTCCATCATGATCTGGAAACCATAGAAGCA 90387
Score = 104 bits (114), Expect = 4e-16
Identities = 157/221 (71%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984
|||||||||||||||||||||| | || || || |||||| | ||| |||||||
Sbjct 89776 CTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGT 89835
Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044
| |||| ||| ||| || || | | | | || |||||||| ||||| |||||
Sbjct 89836 AGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTCAAT 89895
Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGA-TGAGCGCCACGGGCAGCGACTCGCTGA 794103
||||| ||| ||| | ||||||||||||| | | | || || || | ||| | |
Sbjct 89896 ATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCA-AGGAAGAGCCTCAGTCA 89954
Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144
||||| ||||| || ||||||| ||| ||||||| |||
Sbjct 89955 GGAACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGC 89995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916152896760881
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |