Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq76 176 7e-38 seq2 141 1e-27 seq164 118 2e-20 seq53 113 7e-19 >seq76 Length=103561 Score = 176 bits (194), Expect = 7e-38 Identities = 343/504 (68%), Gaps = 21/504 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| |||||||| || |||| ||| |||||||| ||||||||||| | |||||| || Sbjct 2500 CTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGA 2441 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||| ||||| || | ||| | ||| | |||||| | ||| || | ||| Sbjct 2440 CGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCC 2381 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || |||||| ||||||||| | || || | |||||||| |||||||| ||||| Sbjct 2380 AATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTC 2321 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGC-GGGC--GCGCCGT 2073776 || ||| |||||||||| | || ||||| ||||| | || |||| ||| ||| Sbjct 2320 AATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGA---TAGCTGGGCCTGCGGCGT 2264 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 ||| || ||||| ||||| || | || ||| | || ||||||| | ||| Sbjct 2263 GCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAGTTGTA 2204 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 || ||||||| || | | | || |||| || || |||| ||| Sbjct 2203 CGTCTCGAGCACACG-GTCGACACG--------GTCG------CCCCAGATACCGACGGC 2159 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTA 2073956 || ||||||||||||| ||| || |||||||||| | || || |||| ||| || Sbjct 2158 AACACGCATGATCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTTGAGCAGATA 2099 Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016 || || || ||| | |||||||||| |||| | ||| || |||| ||| Sbjct 2098 CGATCGCTCCAAGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGAT 2039 Query 2074017 GGCGGCGTCGAGGGCCTCCTTGTG 2074040 ||| | ||| | | |||||||| Sbjct 2038 GGCAGAGTCCAACTCATCCTTGTG 2015 Score = 147 bits (162), Expect = 3e-29 Identities = 297/443 (67%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||||||||||||||||| | || | ||||||||||||| |||||| Sbjct 2939 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGGATAGTGCCCAGGTTCTTCTGGTT 2882 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| || |||| ||| ||||||| ||||||| | || || |||||| | || || Sbjct 2881 GCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGC 2822 Query 2071692 CGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNN 2071749 | || |||||| |||| | || | || | |||| | ||||||||| Sbjct 2821 CTCGAGGATGGCGTACCATAGCTTCTGGGCCTTGATGGTGAGG--CGGCCGCGGCCCTCG 2764 Query 2071750 NNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGC 2071809 | || || || || || | |||| ||| ||| ||| ||||| Sbjct 2763 CTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGG 2704 Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869 |||| ||||| | ||| | ||||| | || || | || || ||| |||||| Sbjct 2703 CACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGG 2644 Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929 ||| |||||||| | || || ||||| || || |||||||||||||||||||| Sbjct 2643 TCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTC 2584 Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989 || |||||||| | |||| || ||||| ||||||||||| |||||| |||||| Sbjct 2583 TTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAG 2524 Query 2071990 GCGCCCTTGCGCTTGCCGCCGCC 2072012 || || ||||||| ||| || Sbjct 2523 GCTCCAGGGCGCTTGTTGCCACC 2501 >seq2 Length=318682 Score = 141 bits (156), Expect = 1e-27 Identities = 177/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 2019202 CCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGC 2019261 |||||||||| ||| | ||||||||||| || ||||||| | | || || | ||||||| Sbjct 37171 CCGGCCGCCATAAGCTTATCATCCTCGACGAAGCCGACTCCATGACTTCTGGTGCCCAGC 37230 Query 2019262 AGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGC 2019320 | ||||| || ||| || ||||||| ||| |||| || || || ||||| | |||||| Sbjct 37231 AAGCCCTTCG-TCGTACGATGGAAATTTACTCCAATACTACCCGCTTTGCATTTGCCTGC 37289 Query 2019321 AACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCG 2019380 || ||| | | |||| || |||| || |||||||| |||||||||| |||| Sbjct 37290 AATCAGTCTAACAAGATCATTGAGCCCCTACAATCGCGTTGCGCTATCTTGCGCTATGCG 37349 Query 2019381 CGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 || || ||||||| || ||| | |||||| | |||| ||||| |||||| | ||| Sbjct 37350 CGTCTTACCGACGAACAAGTCGTCAAGCGTCTACTACAGATCATCGATGCCGAAGATGTC 37409 >seq164 Length=67468 Score = 118 bits (130), Expect = 2e-20 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||| ||||| |||||||| | || ||| | || ||||||||||| || ||| Sbjct 58797 GCCTCCAACTATCTCGATATCAAGCCTTTGCTGGATGTTGGCTGCAAGACCGTCGCAAAC 58856 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct 58857 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTCAACATC 58904 >seq53 Length=118516 Score = 113 bits (124), Expect = 7e-19 Identities = 227/330 (69%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| |||| ||||| |||| ||||||||||| || || ||||| Sbjct 90064 ACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTT 90123 Query 794400 CTTGAGCCAAAAGATGGCA-CAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||||||| || | || || || || |||||||| ||||| || |||| Sbjct 90124 GCGCAGCCAAAAGATGGAGGCAAAGGCT-CCAGAAAAGAAGATGCCTTCGACAGCAGCAA 90182 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTT-GTTGATCCACTTCATCGCC 794517 | ||| || |||| |||||||| | |||| | | ||||||||| | ||| Sbjct 90183 AAGCGATTAGGCGCTGAGCAAAAGTT----GATTCTCTGTCGCAGATCCACTTGAGAGCC 90238 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCTT 794576 || || || || | | |||| | ||||| || ||| || |||| || | Sbjct 90239 CAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAGGTACGTGCG- 90297 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || | | || ||||| | ||| || ||||| | | ||||||||||| ||||||||||| Sbjct 90298 CTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTT 90357 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||| ||||| ||||| Sbjct 90358 CTCCATCATGATCTGGAAACCATAGAAGCA 90387 Score = 104 bits (114), Expect = 4e-16 Identities = 157/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||||||||||||||||||| | || || || |||||| | ||| ||||||| Sbjct 89776 CTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGT 89835 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 | |||| ||| ||| || || | | | | || |||||||| ||||| ||||| Sbjct 89836 AGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTCAAT 89895 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGA-TGAGCGCCACGGGCAGCGACTCGCTGA 794103 ||||| ||| ||| | ||||||||||||| | | | || || || | ||| | | Sbjct 89896 ATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCA-AGGAAGAGCCTCAGTCA 89954 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144 ||||| ||||| || ||||||| ||| ||||||| ||| Sbjct 89955 GGAACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGC 89995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916152896760881