Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq270 87.8 7e-12 >seq270 Length=41675 Score = 87.8 bits (96), Expect = 7e-12 Identities = 117/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||||||||| || |||||||||| | |||||| Sbjct 23939 CTCAATCAAATGGGCAATGGTCATACGAGAAGGAATAGCGTGAGGGTTGATAATAATGTC 23880 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || | || || | | |||| ||||||||||||| | | | | |||||| Sbjct 23879 GGGAGTGATGCCCTCG---CAGGTGAACGGCATATCTTCTTGGCGATAAGTTACACCAAT 23823 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || || || || |||| | || |||||||| |||||||| Sbjct 23822 GGTACCTTTCTGTCCGTGACGAGACGCAAACTTATCACCAAT 23781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951952416498312